Pairwise Alignments

Query, 282 a.a., putative quinate/shikimate dehydrogenase from Pseudomonas putida KT2440

Subject, 307 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 60/219 (27%), Positives = 94/219 (42%), Gaps = 9/219 (4%)

Query: 66  GLNITYPFKQAILPLLDELSDEARGIGAVNTVVLKDGKRV-GHNTDCLGFAEGLRRGLPD 124
           G+ I  P K  ++ LLD      R  G+VN V   +G ++ G   D  G    L      
Sbjct: 66  GMVIAPPHKPLVVDLLDGCGLFGRVAGSVNVVRRTEGDQLEGDLFDGEGLIGALDHCNIP 125

Query: 125 VARRQVVQMGAGGAGSAVAHALLGEGV----ERLVLFEVDATRAQALVDNLNTHFGAERA 180
              ++V+ +GAG + +A+  AL   GV      +  ++  A +A  +   L+  F A   
Sbjct: 126 FRGKRVLIVGAGVSAAAIGVALAEGGVVNGATHIAFYDKAAGKAAGVAAKLDAFFDA--T 183

Query: 181 VLGTDLATALAEADGLVNTTPVGMAKLPGTPLPVELLHPRLWVAEIIYFPLETELLRAAR 240
           V+  D + A    D +VN TP+G+ +    P+ V  +     + +I+     T L+RAAR
Sbjct: 184 VVAVD-SNAPEGYDLVVNATPLGLVEGDALPVDVARMDDHAALFDILLRNQPTPLVRAAR 242

Query: 241 ALGCRTLDGSNMAVFQAVKAFELFS-GRQADAARMQAHF 278
           A G     G  M + Q       F     A+A R  A F
Sbjct: 243 ARGLNAQAGFEMLIQQMPHYMRYFGHADAAEALRADADF 281