Pairwise Alignments

Query, 428 a.a., putative Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 449 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

 Score =  176 bits (446), Expect = 1e-48
 Identities = 114/322 (35%), Positives = 171/322 (53%), Gaps = 18/322 (5%)

Query: 118 PGPN-AHFQAHLKLADGAPLTIDVTPAPVP----------VARWLPVVLLIQLAVLLLCT 166
           PGP+ A     L+L DG  L +D    P P           A WL  ++L    +++L  
Sbjct: 123 PGPDGAAGVTALRLPDGRWLVVDGRRPPRPPPGPPGGAVGFAVWLAFMILGVTGIVIL-- 180

Query: 167 WLAVRLAIGPLTRLAQAVDNLDPDQPGVQLDESGPREVRYAAVAFNALQARIAAHLKERM 226
             AV     PL  + +A   + PD     L E GP EVR AA A N L AR+ A +  RM
Sbjct: 181 --AVHRLTRPLALVEEAARRIGPDGELPVLPERGPAEVRAAAAAINRLSARLKASMDSRM 238

Query: 227 QLLAAISHDLQTPITRMKLRVEVMDEGVERDKFGSDLDEMEHLVREGVAYARS-MDSSTE 285
           +++A  +HDL+TP+TRM+LR E + +  ER ++ SDL E++ +    +   R  ++  T 
Sbjct: 239 RIVAGAAHDLRTPLTRMRLRAEFIPDEEERAQWLSDLAELDRIADSAIRLVREEVEGGTL 298

Query: 286 ATCRVNLDAFLDSLVFDYQDSGAQVERHGSSDTLLETRPHALRRVLVNLVDNALKFAGAA 345
            T R+  D     +  + ++ G  V    ++   +  RP +L+R + NL  NA    G A
Sbjct: 299 ETVRI--DRLAADVAMELKEIGLAVALLAAAPAYVAGRPLSLKRAVRNLAVNAATHGGGA 356

Query: 346 ELQVSREGSTTIIRVLDNGPGIPVDELDEVLKPFYRVEGSRNRSTGGTGLGLAIAHQLIR 405
            L VS +    ++ + D+GPGIP   + +V +PF+RV+ +R     G GLGLAIA+++I 
Sbjct: 357 RLAVSADAERVVLVIEDDGPGIPEALMGQVFEPFFRVDPARQVKIPGAGLGLAIANEIIG 416

Query: 406 AMGGRLTLSNREQGGLCAQIEL 427
             GGRLTLSNR  GGL  ++EL
Sbjct: 417 RHGGRLTLSNRPGGGLLQRVEL 438