Pairwise Alignments

Query, 347 a.a., putative major facilitator family transporter from Pseudomonas putida KT2440

Subject, 390 a.a., Inner membrane transport protein YdhP from Xanthobacter sp. DMC5

 Score =  117 bits (293), Expect = 5e-31
 Identities = 104/347 (29%), Positives = 160/347 (46%), Gaps = 11/347 (3%)

Query: 3   ISQAMAGQWVTAYALGSLLTAIPLVTLTQGWYRRRALLLAIIG-FVLFNGLTALSNSNTL 61
           +S   AG  V+AYA G L+TA P++TL+     RR LL+  +G F + N ++A ++   +
Sbjct: 37  VSIPAAGLLVSAYAFGVLVTA-PIMTLSFASMPRRRLLVLSMGIFTIGNLISAFADGYWM 95

Query: 62  TLVLRFFTGAAAGLAWGLIAGHARRMVPVPLQGRAMALAMLGQPIALSLGLPIATWLGAG 121
            L  R  T    G  +G+ A  A  +VP   +  A+A    G  IA   G+P+A W+G  
Sbjct: 96  LLAGRIVTSFNHGAFFGVGAVVAASVVPADKRAGAVAAMFSGLTIATIGGVPLAAWVGEA 155

Query: 122 LGWRATFVVVTLVASQLVVWVLRSVPDYPGQAAGKRPAAMQVLRTPGVLIVLLVILTWIL 181
           +GWR  F  + ++ +  +V V  S+P    Q      A ++VL    VL  LL+ +    
Sbjct: 156 VGWRMAFFGIAVIGAIAMVAVRLSLPPLEVQGESDMRAELKVLMRGPVLAALLLTVVSSS 215

Query: 182 GHNILYTYIVPLL--AAAGMAADIGPVLMVFGLSALAGIGLVGLLVDRHLRKLVLLSLAG 239
               ++TYI P+L      ++  +  +L+V+GL    G  L G   DR L   ++ SL  
Sbjct: 216 AMFTVFTYIAPILQVETGAVSGFVTAMLVVYGLGLALGNWLGGRFADRSLDGTLIGSLTA 275

Query: 240 FA--LATLALGQASSWLVYLSIALWGMTYGGAPTLLQTACADAAGQGGDVAQSMLVTVWN 297
            A  L     G  S       + LWG+        LQ      A +   +A +M +  +N
Sbjct: 276 VAVLLVLFVPGMHSHLATVPLVFLWGIASFALVPPLQMRVVHEASEAPHLASAMNIGAFN 335

Query: 298 CAIALGGIIGGLLL-AGAG---VAWFG-GVVLGLIALAWLLAVAGRG 339
              ALG  +GG ++ AG G   V+  G G  L  +A   LL    RG
Sbjct: 336 LGNALGAALGGAVIDAGLGYPAVSLAGAGTALAGLAFTLLLRRGRRG 382