Pairwise Alignments

Query, 306 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  106 bits (265), Expect = 6e-28
 Identities = 88/296 (29%), Positives = 143/296 (48%), Gaps = 20/296 (6%)

Query: 1   MSERIQ-ALHALRAFEVASRYGSFTRAAEELALTQGAVSHHIKTLEALFGCDLFERRGPK 59
           MS+R+  ++ AL+ FE A+R+ SFTRAAEEL LTQ AVS  +  LE +   +LFER   +
Sbjct: 1   MSKRLTPSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEEMLCHNLFERVRQR 60

Query: 60  LSLTEHGRL-LAQELKVGFKIIENACALLRQDRYG-----LRLKAPSTLTVRWLLRALDA 113
           L L+  G L LA+  K+  ++  ++  +L    YG     LR+    T   RWL+  L  
Sbjct: 61  LYLSPAGSLYLAEVHKILTQVDISSRYIL---TYGGETEVLRIATQPTFGDRWLVPKLKD 117

Query: 114 FKKVEDNCSVQLSSVWMDIDSVDFYSEPYDCAILLASGRFPADIESFKLFDEWLIPVCHP 173
           F  +  N  + + +   +++  D      D A     G +P      +LF E ++PVC P
Sbjct: 118 FAALHPNIHLDVRN---ELEPFDVLQAKADIAFFFGQGSWPG-ATCIELFREAVVPVCAP 173

Query: 174 DYMTQVQPQLSDLPRCEFLHPSPDRRDWRRWLARMDALDISIDQGQVFDTLDQGISAAQQ 233
            ++ +     S   R   L  +     W  W         +   G  FDT    I AAQ 
Sbjct: 174 GFVAEGSHASS---RHTLLQCTSRPEAWHEWFLEQGLHSQNSYHGPRFDTFYMCIRAAQS 230

Query: 234 GLGISVVDLVLASTDLAAGRLVTPFKHAVATGDGYYMTWLKASPKARQMHKLRDFL 289
           G G+++V   L + +LA G L+ P+ +A+ +   ++   +  +  A ++ K++ FL
Sbjct: 231 GYGVALVPQYLVADELAQGSLMIPWDYAMPSSGAHF---IAHAEHAGEIPKVKAFL 283