Pairwise Alignments

Query, 281 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 273 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  111 bits (277), Expect = 2e-29
 Identities = 80/270 (29%), Positives = 119/270 (44%), Gaps = 7/270 (2%)

Query: 1   MSPPLREQTHLWQAPALGDVEMLHARYYQQRFAPHVHEGYVFTVIESGAQRFWHRGSEHL 60
           M  P      L +AP    ++ + A +    F PH H+ Y       G Q F +RG    
Sbjct: 1   MGKPTAILDWLHRAPHASGLDRIEAYFAGFAFDPHRHDTYAIGRTLMGVQSFHYRGDMVH 60

Query: 61  APVGSMVLINPDELHTGATAHEAGWRYRGFYPEHERVTGVLDELELGRHGMPSFKDSVIH 120
           +  G+ ++++PDE H G    + G++YR  Y E   +  +L     G   +P   + +  
Sbjct: 61  SLPGTTMVLHPDETHDGHAGSDEGFKYRMIYVEPSLIQQIL-----GGKPLPFIPNGLST 115

Query: 121 DPALALAFSQLHQLSEASASALQQQTAWRQAVLALVQRHGQCAEPSAPGHEPLAVARARE 180
           DP L  A   L Q  E     LQ+Q A      AL    G  A  S    + +A  RARE
Sbjct: 116 DPRLFRASEVLLQNLENPIDPLQEQDALFDLAHALSNVSG--AIISRKTFDYVAAERARE 173

Query: 181 LLESQLADPPSLEALAAAVNLSPFHFARVFRQATGLPPHAWLKQRRLARAREMLKHGLAA 240
            + S L    +L+ +A       +  +R FR   G  P+ +L  RRL   R +L  G + 
Sbjct: 174 FIHSALGRSITLDEMANHAGRDRWALSRDFRLLFGTSPYRYLTMRRLDLVRSLLAQGQSL 233

Query: 241 SQVAFDLGFADQSHLSRQFKQAYGVTPGAY 270
              A   GF DQSH++RQF+  YG+ P  +
Sbjct: 234 VDAAMTAGFTDQSHMTRQFRSTYGMPPSRW 263