Pairwise Alignments

Query, 281 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 283 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  115 bits (288), Expect = 1e-30
 Identities = 82/258 (31%), Positives = 125/258 (48%), Gaps = 13/258 (5%)

Query: 30  QRFAPHVHEGYVFTVIESGAQRFWHRGSEHLAPVGSMVLINPDELHTGATAHEAGWRYRG 89
           + +  H H  Y   +++ GAQ       +  A  G ++  NP E+H G        R+R 
Sbjct: 29  RHYGRHWHATYGVGLLDHGAQSSASGRGKVDAYAGDLITTNPGEVHDGRPLGGPSRRWRM 88

Query: 90  FYPEHERVTGVLDELELGRHGM----PSFKDSVIHDPALAL-----AFSQLHQLSEASAS 140
            Y +   + G+  + + G H +    P  +DS +     +L      +  LH    A+A 
Sbjct: 89  VYFDAAVMAGMRGD-DTGGHDVELTRPVLRDSRLSGALRSLFVRLDEWQALHASRAATAE 147

Query: 141 ALQQQTAWRQAVLALVQRHGQCAEPSAPGHEPLAVARARELLESQLADPPSLEALAAAVN 200
           AL  + +  +    L++ H         G +   V R RE L   L D PSLE LAA   
Sbjct: 148 ALACEESLAEVCGLLLEAHSTALSLRETGGD---VRRLRERLADDLLDAPSLEQLAAMAG 204

Query: 201 LSPFHFARVFRQATGLPPHAWLKQRRLARAREMLKHGLAASQVAFDLGFADQSHLSRQFK 260
           LS F   R F +A G+PPHAWL  +R  RAR +++ G + +  A   GFADQSH++R F 
Sbjct: 205 LSKFQVLRRFEKAYGVPPHAWLLLQRGERARALIRRGESLAGAAAASGFADQSHMTRVFT 264

Query: 261 QAYGVTPGAYRQACVHSA 278
           + +G TPGA+++A V S+
Sbjct: 265 RHFGFTPGAWQRARVLSS 282