Pairwise Alignments

Query, 281 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 269 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  120 bits (300), Expect = 4e-32
 Identities = 88/272 (32%), Positives = 129/272 (47%), Gaps = 13/272 (4%)

Query: 6   REQTHLWQAPALGDVEMLHARYYQQRFAPHVHEGYVFTVIESGAQRFWHR--GSEHLAPV 63
           R    LW+ PAL  VE   A + +  +  H H  +    +++G   F     G +HLAP 
Sbjct: 3   RSHADLWRDPALAHVESRRACHSRACYKAHSHPTFSIGAVDAGRSHFTGAADGQQHLAP- 61

Query: 64  GSMVLINPDELHTGATAHEAGWRYRGFYPEHERVTGVLDELELGRHGMPSFKD-SVIHDP 122
           G++VL+    +H    A    W Y+  + + + +T +   LE G  G+ + +   +  + 
Sbjct: 62  GTLVLVPAHRVHACNPAPGLAWSYQMLHVDADWLTQL--RLESGLGGIEAGEPVRICREA 119

Query: 123 ALALAFSQLHQLSEASASALQQQTAWRQAVLALVQRHGQCAEPSAPGHEPLAVARARELL 182
            +   F  L++L  +SA   ++  A    ++A +      A P       L  A    LL
Sbjct: 120 EVYRQFCALNRLLFSSACNGEKDAA----LIAFLGDLDFSAHPPLAAAPALQAATLNGLL 175

Query: 183 ---ESQLADPPSLEALAAAVNLSPFHFARVFRQATGLPPHAWLKQRRLARAREMLKHGLA 239
              E Q     SLE LA    L  +   R FR ATG  PHA+L   R+ R R++L  GLA
Sbjct: 176 ARIEHQDPAQLSLEVLAREAGLGRYQLIRAFRAATGFTPHAYLLNARVNRGRQLLSEGLA 235

Query: 240 ASQVAFDLGFADQSHLSRQFKQAYGVTPGAYR 271
            ++VA+ LGFADQSH  R FK   GVTPG YR
Sbjct: 236 LAEVAYQLGFADQSHFQRVFKAHVGVTPGQYR 267