Pairwise Alignments

Query, 281 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 298 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

 Score =  134 bits (337), Expect = 2e-36
 Identities = 82/265 (30%), Positives = 129/265 (48%), Gaps = 9/265 (3%)

Query: 13  QAPALGDVEMLHARYYQQRFAPHVHEGYVFTVIESGAQRFWHRGSEHLAPVGSMVLINPD 72
           QA +   +E + AR++   +APH H+ Y   V  SG Q F +RG+ H +  G++++++PD
Sbjct: 42  QARSSEGIERIDARFHGNAYAPHRHDTYALGVTLSGVQTFSYRGTSHFSMPGNVIVLHPD 101

Query: 73  ELHTGATAHEAGWRYRGFYPEHERVTGVLDELELGRHGMPSFKDSVIHDPALALAFSQ-L 131
           E+H G    + G  YR  Y   E+ T      E G + +P  + +VI D       ++ L
Sbjct: 102 EIHDGGAGTDEGLHYRMLYLPPEKTT------EAGYNTLPFARSAVIEDEEFRQCLTEAL 155

Query: 132 HQLSEASASALQQQTAWRQAVLALVQRHGQCAEPSAPGHEPLAVARARELLESQLADPPS 191
             L     S L   T W+  +  L+ +H   +  S    +  AV   R+ L    AD   
Sbjct: 156 GNLDGEPDSLLL--TDWQSRLSDLLWKHSNGSARSIKWIDRAAVLLCRDYLLENSADTVV 213

Query: 192 LEALAAAVNLSPFHFARVFRQATGLPPHAWLKQRRLARAREMLKHGLAASQVAFDLGFAD 251
            + L     L  F   R FR   G  PH +L  RRL + ++M++ G + ++ AF  GFAD
Sbjct: 214 SQELEQISGLDRFTLFRHFRCVFGTSPHRYLIMRRLQKCKDMMRAGASLAETAFACGFAD 273

Query: 252 QSHLSRQFKQAYGVTPGAYRQACVH 276
           Q+H +R FK A+G+ PG +     H
Sbjct: 274 QAHFTRHFKNAFGMPPGRWLSLVSH 298