Pairwise Alignments

Query, 1235 a.a., cobalamin-dependent methionine synthase from Pseudomonas putida KT2440

Subject, 1236 a.a., methionine synthase from Pseudomonas simiae WCS417

 Score = 2165 bits (5611), Expect = 0.0
 Identities = 1077/1236 (87%), Positives = 1149/1236 (92%), Gaps = 1/1236 (0%)

Query: 1    MSDRSARLQALQNALKERILILDGGMGTMIQSYRLEEHDYRGTRFADWPSDVKGNNDLLL 60
            MSDRS RLQAL  ALKERILILDGGMGTMIQSY+LEE+DYRG RFADWPSDVKGNNDLL+
Sbjct: 1    MSDRSVRLQALHQALKERILILDGGMGTMIQSYKLEENDYRGKRFADWPSDVKGNNDLLV 60

Query: 61   LSRPDVIAAIEKAYLDAGADILETNTFNATQISQADYGMESLVYELNVEGARIARQVADA 120
            ++RPDVI  IEKAYLDAGADILETNTFNAT+IS ADYGME+L +ELNVEGAR+AR++ADA
Sbjct: 61   ITRPDVIGGIEKAYLDAGADILETNTFNATRISMADYGMEALAFELNVEGARLARKIADA 120

Query: 121  KTLETPDKPRFVAGVLGPTSRTCSISPDVNDPGFRNVTFDELVENYIEATRGLIEGGADL 180
            KT ETPDKPRFVAGVLGPTSRTCS+SPDVN+PG+RNVTFDELVENY EAT+GLIEGGADL
Sbjct: 121  KTAETPDKPRFVAGVLGPTSRTCSLSPDVNNPGYRNVTFDELVENYTEATKGLIEGGADL 180

Query: 181  ILIETIFDTLNAKAAIFAVQQVFEDDNVELPIMISGTITDASGRTLSGQTTEAFWNSVRH 240
            ILIETIFDTLNAKAAIFAVQ VFE+ N+ELPIMISGTITDASGRTLSGQTTEAFWNSV H
Sbjct: 181  ILIETIFDTLNAKAAIFAVQGVFEELNIELPIMISGTITDASGRTLSGQTTEAFWNSVAH 240

Query: 241  AKPISVGLNCALGAKDLRPYLEELATKADTHVSAHPNAGLPNAFGEYDETPAEMAAVVEE 300
            AKPISVGLNCALGA +LRPYLEEL+ KA+THVSAHPNAGLPN FGEYDE P++ A V+EE
Sbjct: 241  AKPISVGLNCALGASELRPYLEELSNKANTHVSAHPNAGLPNEFGEYDELPSQTAKVIEE 300

Query: 301  FAASGFLNIIGGCCGTTPGHIQAIAEAVAKYKPREIPEIAKACRLSGLEPFTIDRQSLFV 360
            FA SGFLNI+GGCCGTTPGHI+AIA+AVA Y PR+IP+I KACRLSGLEPFTIDR SLFV
Sbjct: 301  FAQSGFLNIVGGCCGTTPGHIEAIAKAVAGYAPRQIPDIPKACRLSGLEPFTIDRSSLFV 360

Query: 361  NVGERTNITGSAKFARLIREENYTEALEVALQQVEAGAQVIDINMDEGMLDSQAAMVRFL 420
            NVGERTNITGSAKFARLIRE+NYTEALEVALQQVEAGAQVIDINMDEGMLDS+ AMV FL
Sbjct: 361  NVGERTNITGSAKFARLIREDNYTEALEVALQQVEAGAQVIDINMDEGMLDSKKAMVTFL 420

Query: 421  NLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFKHHARLCKRYG 480
            NLIAGEPDISRVPIMIDSSKW+VIEAGLKCIQGKGIVNSISMKEGVEQF HHA+LCKRYG
Sbjct: 421  NLIAGEPDISRVPIMIDSSKWDVIEAGLKCIQGKGIVNSISMKEGVEQFIHHAKLCKRYG 480

Query: 481  AAVVVMAFDEVGQADTAARKKEICQRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNN 540
            AAVVVMAFDE GQADT ARKKEIC+RSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNN
Sbjct: 481  AAVVVMAFDEAGQADTEARKKEICKRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNN 540

Query: 541  YAVDFIEACAYIRDHLPHALSSGGVSNVSFSFRGNNPVREAIHSVFLYHAIQNGLTMGIV 600
            YAVDFI ACAYIRD LP+AL+SGGVSNVSFSFRGNNPVREAIHSVFL +AI+NGLTMGIV
Sbjct: 541  YAVDFINACAYIRDELPYALTSGGVSNVSFSFRGNNPVREAIHSVFLLYAIRNGLTMGIV 600

Query: 601  NAGQLEIYDEIPAQLREKVEDVVLNRTPHGTDALLAIADDYKGGGATKEVENEEWRSLPV 660
            NAGQLEIYD+IPA+LR+ VEDVVLNRTP GTDALLAIAD YKG G+ KE E EEWR   V
Sbjct: 601  NAGQLEIYDQIPAELRDAVEDVVLNRTPDGTDALLAIADKYKGDGSVKEAETEEWRGWDV 660

Query: 661  EKRLEHALVKGITAFIVEDTEACRQQCARPIEVIEGPLMNGMNVVGDLFGAGKMFLPQVV 720
             KRLEHALVKGIT  IVEDTE  R   ARPIEVIEGPLM+GMN+VGDLFGAGKMFLPQVV
Sbjct: 661  NKRLEHALVKGITTHIVEDTEESRLSFARPIEVIEGPLMSGMNIVGDLFGAGKMFLPQVV 720

Query: 721  KSARVMKQAVAHLIPFIEAEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIV 780
            KSARVMKQAVAHLIPFIE EKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIV
Sbjct: 721  KSARVMKQAVAHLIPFIELEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIV 780

Query: 781  DLGVMVPAEKILQTAREQKCDIIGLSGLITPSLDEMVHVAREMQRQGFELPLMIGGATTS 840
            DLGVMVPAEKILQ A+EQKCDIIGLSGLITPSLDEMVHVAREMQRQ F LPLMIGGATTS
Sbjct: 781  DLGVMVPAEKILQVAKEQKCDIIGLSGLITPSLDEMVHVAREMQRQDFHLPLMIGGATTS 840

Query: 841  KAHTAVKIEPKYSNDAVIYVTDASRAVGVATQLLSKELKPGFVEKTRLEYVDVRERTANR 900
            KAHTAVKIEPKYSNDAV+YVTDASRAVGVATQLLSKELK GFVE+TR EYV+VRERT+NR
Sbjct: 841  KAHTAVKIEPKYSNDAVVYVTDASRAVGVATQLLSKELKAGFVERTREEYVEVRERTSNR 900

Query: 901  SARTERLSYAQAIAAKPQYDWAGYQPTAPSFTGVKVLEDIDLRTLAEYIDWTPFFISWDL 960
            SARTERLSY  AIA KPQ+DW+ Y P  P+FTG KVL++IDL+ LAEYIDWTPFFISWDL
Sbjct: 901  SARTERLSYPAAIAKKPQFDWSTYSPVVPTFTGAKVLDNIDLKVLAEYIDWTPFFISWDL 960

Query: 961  AGKFPRILTDEVVGEAATALYKDAREMLDKLIDEKLISARAVFGFWPANQVDDDDIEVYG 1020
            AGKFPRILTDEVVGEAATALY DA+EML KLIDEKLISARAVFGFWP NQV DDD+EVYG
Sbjct: 961  AGKFPRILTDEVVGEAATALYADAQEMLKKLIDEKLISARAVFGFWPTNQVQDDDLEVYG 1020

Query: 1021 EDGQALATLHHLRQQTIKPDGKPNWSLADFVAPKDSGVTDYVGGFITTAGIGAEEVAKAY 1080
            +DGQ +A LHHLRQQ IK DGKPN+SLADFVAPKDSGVTDY+GGFITTAGIGAEEVAKAY
Sbjct: 1021 DDGQPIAKLHHLRQQIIKTDGKPNFSLADFVAPKDSGVTDYIGGFITTAGIGAEEVAKAY 1080

Query: 1081 QDKGDDYSSIMVKALADRLAEACAEWLHEQVRKEHWGYARDEHLDNEALIKEQYSGIRPA 1140
            QD GDDY+SIMVKALADRLAEACAEWLH+QVRKEHWGYA+DE LDNEALIKEQYSGIRPA
Sbjct: 1081 QDAGDDYNSIMVKALADRLAEACAEWLHQQVRKEHWGYAKDEQLDNEALIKEQYSGIRPA 1140

Query: 1141 PGYPACPDHTEKETLFRLLDGTAIG-ETGPSGVYLTEHFAMFPAAAVSGWYFAHPQAKYF 1199
            PGYPACPDHTEK  LF+LLD  A     G SGV+LTEH+AMFPAAAVSGWYFAHPQA+YF
Sbjct: 1141 PGYPACPDHTEKAQLFQLLDPEAREMHAGRSGVFLTEHYAMFPAAAVSGWYFAHPQAQYF 1200

Query: 1200 AVGKVDKDQIERYSARKGQDISVSERWLAPNLGYDS 1235
            AVGKVDKDQ+  Y+ARKGQD+SV+ERWLAPNLGYD+
Sbjct: 1201 AVGKVDKDQVASYTARKGQDLSVTERWLAPNLGYDN 1236