Pairwise Alignments

Query, 1235 a.a., cobalamin-dependent methionine synthase from Pseudomonas putida KT2440

Subject, 1257 a.a., methionine synthase from Agrobacterium fabrum C58

 Score = 1501 bits (3886), Expect = 0.0
 Identities = 776/1238 (62%), Positives = 923/1238 (74%), Gaps = 14/1238 (1%)

Query: 3    DRSARLQALQNALKERILILDGGMGTMIQSYRLEEHDYRGTRFADWPSDVKGNNDLLLLS 62
            D +   +AL++A  ERILILDG MGT IQ    +E  +RG RF       KGNNDLL+L+
Sbjct: 14   DGAEIFKALRDAASERILILDGAMGTQIQGLGFDEDHFRGDRFIGCACHQKGNNDLLILT 73

Query: 63   RPDVIAAIEKAYLDAGADILETNTFNATQISQADYGMESLVYELNVEGARIARQVADAKT 122
            +PD I  I   Y  AGADILETNTF++T+I+QADY ME+ VY+LN EGA I R+ A    
Sbjct: 74   QPDAIEEIHYRYAMAGADILETNTFSSTRIAQADYEMENAVYDLNREGAAIVRRAAQRAE 133

Query: 123  LETPDKPRFVAGVLGPTSRTCSISPDVNDPGFRNVTFDELVENYIEATRGLIEGGADLIL 182
             E   + RFVAG +GPT+RT SISPDVN+PG+R V+FD+L   Y E   GLI+GGAD+IL
Sbjct: 134  RED-GRRRFVAGAIGPTNRTASISPDVNNPGYRAVSFDDLRIAYGEQIDGLIDGGADIIL 192

Query: 183  IETIFDTLNAKAAIFAVQQVFEDDNVELPIMISGTITDASGRTLSGQTTEAFWNSVRHAK 242
            IETIFDTLNAKAAIFA ++ FE   + LP+MISGTITD SGRTLSGQT  AFWNSVRHA 
Sbjct: 193  IETIFDTLNAKAAIFACEERFEAKGIRLPVMISGTITDLSGRTLSGQTPSAFWNSVRHAN 252

Query: 243  PISVGLNCALGAKDLRPYLEELATKADTHVSAHPNAGLPNAFGEYDETPAEMAAVVEEFA 302
            P ++GLNCALGA  +RP+L+EL+  ADT V A+PNAGLPN FG+YDETP  MA  VE F 
Sbjct: 253  PFTIGLNCALGADAMRPHLQELSDVADTFVCAYPNAGLPNEFGQYDETPEMMARQVEGFV 312

Query: 303  ASGFLNIIGGCCGTTPGHIQAIAEAVAKYKPREIPEIAKACRLSGLEPFTIDRQSLFVNV 362
              G +NI+GGCCG+TP HI+AIAEAV  YKPREIPE      LSGLEPF + +   FVNV
Sbjct: 313  RDGLVNIVGGCCGSTPEHIRAIAEAVKDYKPREIPEHKPFMSLSGLEPFVLTKDIPFVNV 372

Query: 363  GERTNITGSAKFARLIREENYTEALEVALQQVEAGAQVIDINMDEGMLDSQAAMVRFLNL 422
            GERTN+TGSA+F +LI   +YT AL VA  QVE GAQ+IDINMDEG++DS+ AMV FLNL
Sbjct: 373  GERTNVTGSARFRKLITAGDYTAALAVARDQVENGAQIIDINMDEGLIDSEKAMVEFLNL 432

Query: 423  IAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFKHHARLCKRYGAA 482
            IA EPDI+RVP+MIDSSK+E+IEAGLKC+QGK IVNSIS+KEG E+F   ARL   YGAA
Sbjct: 433  IAAEPDIARVPVMIDSSKFEIIEAGLKCVQGKSIVNSISLKEGEEKFLQQARLVHNYGAA 492

Query: 483  VVVMAFDEVGQADTAARKKEICQRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYA 542
            VVVMAFDEVGQADT  RK EIC R+Y +L  + G  PEDIIFDPN+FAVATGIEEHNNY 
Sbjct: 493  VVVMAFDEVGQADTYQRKVEICARAYKLLTEKAGLSPEDIIFDPNVFAVATGIEEHNNYG 552

Query: 543  VDFIEACAYIRDHLPHALSSGGVSNVSFSFRGNNPVREAIHSVFLYHAIQNGLTMGIVNA 602
            VDFIEA   IR+ +P    SGGVSN+SFSFRGN PVREA+H+VFLYHAIQ G+ MGIVNA
Sbjct: 553  VDFIEATKTIRETMPLTHISGGVSNLSFSFRGNEPVREAMHAVFLYHAIQVGMDMGIVNA 612

Query: 603  GQLEIYDEIPAQLREKVEDVVLNRTPHGTDALLAIADDYKGGGATK-EVENEEWRSLPVE 661
            GQL +YD I A+LRE  EDVVLNR    T+ LL +A+ ++G G  + +V++  WR  PVE
Sbjct: 613  GQLAVYDNIDAELREACEDVVLNRRDDATERLLEVAERFRGTGEKQAKVQDLSWREYPVE 672

Query: 662  KRLEHALVKGITAFIVEDTEACRQQCARPIEVIEGPLMNGMNVVGDLFGAGKMFLPQVVK 721
            KRLEHALV GIT +I  DTE  RQQ ARP+ VIEGPLM GMNVVGDLFG+GKMFLPQVVK
Sbjct: 673  KRLEHALVNGITDYIEADTEEARQQAARPLHVIEGPLMAGMNVVGDLFGSGKMFLPQVVK 732

Query: 722  SARVMKQAVAHLIPFIEAEK----GDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGY 777
            SARVMKQAVA L+P++E EK    G +  A GK+LMATVKGDVHDIGKNIVGVVL CN Y
Sbjct: 733  SARVMKQAVAVLLPYMEEEKRLNGGSERSAAGKVLMATVKGDVHDIGKNIVGVVLACNNY 792

Query: 778  DIVDLGVMVPAEKILQTAREQKCDIIGLSGLITPSLDEMVHVAREMQRQGFELPLMIGGA 837
            +I+DLGVMVP  KIL+TA  +K D+IGLSGLITPSLDEMVHVA EM+RQGF++PL+IGGA
Sbjct: 793  EIIDLGVMVPTTKILETAIAEKVDVIGLSGLITPSLDEMVHVAAEMERQGFDIPLLIGGA 852

Query: 838  TTSKAHTAVKIEPKYSNDAVIYVTDASRAVGVATQLLSKELKPGFVEKTRLEYVDVRERT 897
            TTS+ HTAVKI P+Y     IYVTDASRAVGV + LLS+E KP +++  R EY  V E  
Sbjct: 853  TTSRVHTAVKIHPRYEQGQAIYVTDASRAVGVVSALLSEEQKPAYIDGIRAEYAKVAEAH 912

Query: 898  ANRSARTERLSYAQAIAAKPQYDWAGYQPTAPSFTGVKVLEDIDLRTLAEYIDWTPFFIS 957
            A      +RL  ++A     + DW+ Y    P F G KV E  DL  L+ YIDWTPFF +
Sbjct: 913  ARNEREKQRLPLSRARENAHKIDWSSYSVVKPQFFGTKVFETYDLEELSRYIDWTPFFQT 972

Query: 958  WDLAGKFPRILTDEVVGEAATALYKDAREMLDKLIDEKLISARAVFGFWPANQVDDDDIE 1017
            W+L G+FP IL DE  GEAA  LY DA+ ML K+I+EK    RAV GFWPAN V  DDI 
Sbjct: 973  WELKGRFPAILEDEKQGEAARQLYADAQAMLAKIIEEKWFRPRAVIGFWPANAV-GDDIR 1031

Query: 1018 VYGEDG--QALATLHHLRQQTIKPDGKPNWSLADFVAPKDSGVTDYVGGFITTAGIGAEE 1075
            ++ ++G  + LAT   LRQQ  K DG+PN +L+DFVAP DSGV DYVGGF+ TAGI    
Sbjct: 1032 LFTDEGRKEELATFFTLRQQLSKRDGRPNVALSDFVAPVDSGVADYVGGFVVTAGIEEVA 1091

Query: 1076 VAKAYQDKGDDYSSIMVKALADRLAEACAEWLHEQVRKEHWGYARDEHLDNEALIKEQYS 1135
            +A+ ++   DDYSSI+VKALADR AEA AE +HE+VRKE WGYA DE L  + LI E Y+
Sbjct: 1092 IAERFERANDDYSSILVKALADRFAEAFAERMHERVRKEFWGYAPDEALAGDDLIGEAYA 1151

Query: 1136 GIRPAPGYPACPDHTEKETLFRLLDGTAIGETGPSGVYLTEHFAMFPAAAVSGWYFAHPQ 1195
            GIRPAPGYPA PDHTEK+TLF LLD      T  +GV LTE +AM+P ++VSG Y  HP+
Sbjct: 1152 GIRPAPGYPAQPDHTEKKTLFALLDA-----TNAAGVELTESYAMWPGSSVSGLYIGHPE 1206

Query: 1196 AKYFAVGKVDKDQIERYSARKGQDISVSERWLAPNLGY 1233
            + YF V KV++DQ+  Y+ RK   ++  ERWL P L Y
Sbjct: 1207 SYYFGVAKVERDQVLDYARRKDMPVTEVERWLGPVLNY 1244