Pairwise Alignments

Query, 358 a.a., putative Periplasmic sugar-binding protein from Pseudomonas putida KT2440

Subject, 307 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 58.2 bits (139), Expect = 3e-13
 Identities = 66/272 (24%), Positives = 123/272 (45%), Gaps = 30/272 (11%)

Query: 2   LKALCQSLCLVLPLVA--NAQPASVVFLNP---GLSTETFWTSYTRFMQAAADELGMTLQ 56
           +K L ++LCL+   +    A PA      P   G S +     Y   M+ A +E G T+ 
Sbjct: 1   MKMLPKTLCLLAVSITLGTAAPAFADAAKPIRIGASFQEINNPYFVTMKNALEEAGATIG 60

Query: 57  VQY--SERRADLTLTQARAILSAPQRPDYLVLVNEQYVAPEILRLSRGTGVKLLLVNNGL 114
            +   ++ R D++  Q   +    Q+   ++L+N           +   GV+  + +   
Sbjct: 61  AKLIITDARHDVS-KQVSDVEDMLQKGIDILLINP----------TDSVGVQSAVKSAHA 109

Query: 115 TASQRLSIEGQPDKYAEPLGTLM-SNDEQAGFQMLHLMLAQLPRDAGPVDLVAFAGVKTT 173
                ++++ Q D    PL + + S +  AGFQ     LA+   D G + ++   G+   
Sbjct: 110 AGVVVVAVDAQADG---PLDSFVGSKNFDAGFQACEY-LAKNIGDKGNIAILD--GIAVV 163

Query: 174 PASQLRVEGMRRALADFPQVRLRQVVYGGWNRQRAYEQAKQLLERYPATRLVWSANDQMA 233
           P  + RV G + A+A  P +++  +  G   R +A    + +L+  P  + ++S ND  +
Sbjct: 164 PILE-RVRGCKEAVAKHPDIKIVSIQNGKQERDQALTVTENMLQAQPTLKGIFSVNDNGS 222

Query: 234 FGAMQAFEEAGHTPGRDVLFAAVNSSPEALRA 265
            GA+ A E +    G DV   +V+ +PEA++A
Sbjct: 223 LGALSAIEAS----GLDVKLVSVDGAPEAIKA 250