Pairwise Alignments

Query, 358 a.a., putative Periplasmic sugar-binding protein from Pseudomonas putida KT2440

Subject, 319 a.a., ribose ABC transporter, periplasmic ribose-binding subunit from Pseudomonas putida KT2440

 Score = 49.7 bits (117), Expect = 1e-10
 Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 2/107 (1%)

Query: 140 DEQAGFQMLHLMLAQLPRDAGPVDLVAFAGVKTTPASQLRVEGMRRALADFPQVRLRQVV 199
           D + G +++   LA     AG   +    GV TT  +Q R  G + A+ D  Q+++  V 
Sbjct: 145 DNRKGARLVGDYLASQKLKAGD-QVGIIEGVSTTTNAQQRTAGFKDAM-DAAQMKIVSVQ 202

Query: 200 YGGWNRQRAYEQAKQLLERYPATRLVWSANDQMAFGAMQAFEEAGHT 246
            G W   +    A  +L  YP  + + + ND MA GA+ A   AG T
Sbjct: 203 SGNWEIDKGNAVAASMLNEYPDLKALLAGNDSMALGAVSAVRAAGKT 249