Pairwise Alignments

Query, 1395 a.a., Leucine-rich repeat domain protein from Pseudomonas putida KT2440

Subject, 1964 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  249 bits (636), Expect = 2e-69
 Identities = 263/979 (26%), Positives = 402/979 (41%), Gaps = 131/979 (13%)

Query: 521  WRIHHPSRPGAYSPALEHNGAGGWVHEFEQPQRW--HDPAYMVRRLASRTAQVPDEAVSV 578
            WRI HP+   AY+P L HNGAG W HE+E P  W  H P Y   RL         +A++ 
Sbjct: 994  WRIPHPTLHDAYAPVLTHNGAGAWRHEWETPLTWDGHKPFY---RLGPAVGAWSPDAINQ 1050

Query: 579  ALQTTGFEADCLRRLLLENAPAPARLLDAIERQQLHRDFPM---LRGDAFEEVFNERQIS 635
              Q +G     LRR+ L N   PA L++ IER  LHR          D F+E+  E  I 
Sbjct: 1051 IQQVSGVTPAMLRRVHLRNERPPAILMETIERFTLHRRVKAGVETGWDFFDELLGE--IG 1108

Query: 636  PQAAD------------------------------------------------RVLMRDF 647
            P++AD                                                +VL RDF
Sbjct: 1109 PESADVLVGSAGLSRADQVRRLETFVAQDKPGMARLFFKALLHKSALSSEPLAQVLQRDF 1168

Query: 648  PGLSHRCAREIVEGASSIEMESLTGAGRVPLALAERARWAIRDSRIDRACAGLRQAAAEN 707
            P L+ + A ++V   + +E  SL  AGRVPL   +  RW I   R  RA  G+    A +
Sbjct: 1169 PSLTAQIAEDLVRDLTPVERRSLE-AGRVPLTKTKAIRWWIEYLRKTRAMEGVHLGGAAS 1227

Query: 708  DDTGKLALGLIDAIAPWSAGVNVEL-----------PAAGR------------------- 737
             D+ KL L  +  +  WS    VE+           PA GR                   
Sbjct: 1228 ADSSKLILHTVAEMDGWSVQTRVEVRERGRLIDRVGPAEGRPKRVLEALDGRYQAFAPQS 1287

Query: 738  ----------GGLLQTLRRQLDSRQRQLLGISQMTD-DALGERLGREALADREAAARMIG 786
                      G  L  L   L   +RQ +G +     + L + +        E A  ++ 
Sbjct: 1288 NGTLQPLGNPGDFLTVLLDALPPPERQAVGYTHAGGVEELTQEICYRLERHWEFAETLLE 1347

Query: 787  LARVGQGIRPPVRLFDGRLGYPLSG--HLTGTRQALRRTLNHVYPVMSSEQLEAYLQDLA 844
            + R      PP R+ DGR+GYPLSG   L    +     L  ++P  + EQ    L++L+
Sbjct: 1348 IGR-RPWYNPPRRVADGRIGYPLSGGNELGAVDRDQVARLRQLFPTKTDEQAFEILENLS 1406

Query: 845  WRGVDPWNHVSQLLQAKVSLKQALQAWRNDAGLNIVRRLR-RFKVARRITASWQRF-TPG 902
                +  + ++ L + + +L  +L+ W     L    +L+ + + + RI   W +  +P 
Sbjct: 1407 DSVQEREDAINTLFRERDALNDSLERW---CLLGKPEQLKAQVEASARIRRCWSKEDSPR 1463

Query: 903  EVAGDYHLTLVGERVGELPTLPDNVSFDHITHLTLRDMQVTSLDAGFLGRFSKVRNLDLR 962
             V   + L L    + +LP +     F H+  L+LR   +  L   FLGRF  +R L L 
Sbjct: 1464 GVM--FELYLDDLALEDLPQV--TAHFGHVMQLSLRKNLLQELPMKFLGRFPALRTLFLD 1519

Query: 963  NNQLTRLPAGIEQLTELRTLRLGGNQIVLSSEDNLRLSQLVELRRLELNGNPVGLLPPLA 1022
             N+L  +P G+  L  L+ L L  N+I   S D  RL  L  L  L L+ NP+G    L 
Sbjct: 1520 GNRLDHVPQGLSALQHLKQLSLANNRIQPESADIRRLQGLTRLTTLNLSNNPLGRGKRLN 1579

Query: 1023 SFPL--LRRLSLRNTGLGELPADLARHGNLELLDMRDNQIQTLPEALSLVPLRLWRGLEL 1080
             + L  L  L LRNT L  LP  +     L  LD+RDN+ + L  +   +   ++R + L
Sbjct: 1580 VYALTALEVLKLRNTQLDLLPLWVVMLPRLRTLDLRDNRFKVLTHSDLHLNETVYRAMNL 1639

Query: 1081 HDNPLSDETLQRLQLARASAG-AAERRRVAHATAIP-NAAAPWLSGFTPAQREVRLASWN 1138
            H N LS  TL+ L   R   G       + H  A P  +   WL      +   R A W 
Sbjct: 1640 HGNALSQATLRLLSQYRRRPGYQTIDFGLWHDGAFPLPSVERWLLPVPLNEVPQRRAEWA 1699

Query: 1139 RLNQEAGAQDLFRFFSDLRALR--------EYDAQPRDLQARVWHILEACEQHAEVRASL 1190
             L   AGAQ    FF+ L  +         E+ A  +D+  RVW +++    +  ++  L
Sbjct: 1700 LL---AGAQMADGFFNLLWNVSSYPPLIAPEHHALRQDITRRVWQLIDGANHNGRLQQIL 1756

Query: 1191 FEQVARPRSCS-DELLLTLSELEVGALVAKAGTAGTGLQKERALVRLGRSLFRLDKVNAI 1249
            F+   R  S   D  LL L+E+E+  L  +   AG         V   R+L RL  ++  
Sbjct: 1757 FQTPLRYMSGGIDGWLLCLNEIELAMLPVQM-LAGNVDAAGPDFVNYYRALRRLGAIDHH 1815

Query: 1250 AARHIADYFSNDPVEVYLTYRVRLADSLDLPVQPSHLSYESFSGVGREDLDAARSEVLRQ 1309
              R      + +    +L YR+ LA SLDLP+        + +      +      +  +
Sbjct: 1816 LLRAFPQQSAQEACVRFLAYRIALASSLDLPLALPGRFDAATAVPDAPSVIRILQRIKNE 1875

Query: 1310 ETPQALAQALADRTFWQDYLQEQQAARFSRLDEPFQQRLDALLEQ--SKTLSDGDYFAQV 1367
            E        L +  +W ++L+ +   RF      +Q+ L+   ++  +  +++G Y   +
Sbjct: 1876 ELNLNWPSRLENEEYWVEFLERKYPQRFEAALAHYQRELELATDKVTNGDINEGTYKHAL 1935

Query: 1368 EHICAAREVAKRQLLLELS 1386
            E +      AK  L+  L+
Sbjct: 1936 ESLAVQMRQAKADLVRVLT 1954



 Score = 29.3 bits (64), Expect = 0.004
 Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 7/125 (5%)

Query: 66  LKRAPEARSIKQVDLRQAQLRLVTLQPKPSISPALPSTSTRIVSTQTLLSAALHNFHEKE 125
           L+ A +  +   VD + A++    L P   +         ++ S  TL  AA  N+   +
Sbjct: 91  LRDALKTLTGSDVDPKTARIYTRYLAPARRVRREAQGDQVKVASL-TLWEAACMNY---D 146

Query: 126 MQPGWFAAGSQLVTASGHL---LPLSAQAFVRLCRDIDIGRRYQSHLQSKLEGEGGAVES 182
              GW   G+  +  + ++   +  SA AF+ L R ++IG   ++ L   L       ++
Sbjct: 147 GVTGWSFPGNTGIADASYMDSSINASAAAFIALVRKLNIGETLRTSLAQALRASSSLGDA 206

Query: 183 TLEEA 187
            + +A
Sbjct: 207 IMRQA 211