Pairwise Alignments

Query, 1395 a.a., Leucine-rich repeat domain protein from Pseudomonas putida KT2440

Subject, 1629 a.a., conserved protein of unknown function containing Leucine-rich repeat domain from Pseudomonas putida KT2440

 Score =  197 bits (502), Expect = 5e-54
 Identities = 179/627 (28%), Positives = 262/627 (41%), Gaps = 53/627 (8%)

Query: 22  WLKRASAQELTELRAAALRQQRAQDQVDAWLGAITPLDEFAESLLKRAPEARSIKQVDLR 81
           W   A      +L  A   + +   QV   LG    +  F   LL      R    V + 
Sbjct: 49  WYATADEPTREQLHNALQTRNKRLAQVKQALGEFKDIIAFCGPLLTE----RLKLNVPVD 104

Query: 82  QAQLRLVTLQPKPSISPALPSTSTRIV----------------STQTLLSAALHNFHEKE 125
           +AQ      + + +I   +P   T +V                 T++LL AALHNF   +
Sbjct: 105 RAQYVFQPFESEANIWVGVPDVETPLVPDVEADVLATRPVGQPQTRSLLEAALHNFEGLD 164

Query: 126 MQPGWFAAGSQLVTASGHLLPLSAQA---FVRLCRDIDIGRRYQSHLQSKLEGEGGAVES 182
               +    S+L  A+G   PL+      FVR CR +D+G+RYQ HL +  EG   A   
Sbjct: 165 EVGPY----SRLTNAAGSDTPLAGLTMADFVRHCRALDLGKRYQDHLLATHEGANRAEIQ 220

Query: 183 TLEEAL-RANLALAAIAARIKDEIDEQTCQWINQAVGTASFLPADNAVLKCHTLRLLGKE 241
            L  A  R  L + A+ AR+K  + +     + Q    +     DN  L C    L    
Sbjct: 221 RLSIAANREALRVQALIARLKGLLSKAGLDALAQLCDGSPHPTYDNEALHCWNFNLFDVP 280

Query: 242 VIGALVIEVRQNARLLGVIAWFPEDPYAPVSWHTSWELLYMTLGIRLRNEAYRRYFQRFV 301
           V   L I      R    I + P D   PV    S +     L  RL    +RR    F 
Sbjct: 281 VHEVLFIGPDNPYRTNPCIVYVPGDSEHPVREFASRQEAGKHLRSRLLQSEFRRALVHFA 340

Query: 302 AERDRIAFCAALNALLSHGNT----------VLPLELDGRCFAIEGDVFVALRQARIEKM 351
            +  +      L   L   +           V+P  L      I  D +  L  A + +M
Sbjct: 341 YKDRQKELAVKLEIALFEEDEAGIRKPRIMPVIPFTLS----PIRTDPWTNLYNAHLARM 396

Query: 352 LDDARVLAVSTEDEDVADRRARLQGYLDLGLSVAGLAALFVPVLGQALLGLTVVQLAGEV 411
             DA+ +AV T + D   R  RL+ + DLG++V  +AA FVP L   +LG+    L   V
Sbjct: 397 KADAKTIAVPTAEVDANARNERLKYWFDLGMNVLNVAAFFVPGLNTVMLGVFAYDLMSSV 456

Query: 412 YEGYQDWQLGDRDAALGHLFNVADTVVMAAVTAAGATALGKLAQRVARVDAMVPVSLGDG 471
           + G++ W+ GD   AL  L ++A    + A  A G     ++ Q    VDA+  V   D 
Sbjct: 457 FTGFEAWEEGDTRQALAQLESLAINAGVIAGFAVGT----RIVQASGFVDALKSVWHEDK 512

Query: 472 QLRLCDPSLSGYQR-----EGVDLMVGQAVNETGRSLRRLHDAVYEVSEGDDGAWRIHHP 526
           ++ L  P +  Y       EG    +   V+  G++  +L   +YEV +G D  WR+ HP
Sbjct: 513 EV-LWHPDMKPYASTAAIPEGAQPDLLGHVHVDGKTYLKLDGTLYEVFQGADQQWRVRHP 571

Query: 527 SRPGAYSPALEHNGAGGWVHEFEQPQRWHDPAYMVRRLASRTAQVPDEAVSVALQTTGFE 586
               AY+P L H+G   W    EQP  W +   + RRL S +A + D  +  A++TTG +
Sbjct: 572 DDAQAYAPRLLHHGNARWQLAHEQPLEW-EREQLARRLGSHSAGLDDSELDHAMRTTGTD 630

Query: 587 ADCLRRLLLENAPAPARLLDAIERQQL 613
            D LRR      P PA L+D ++R QL
Sbjct: 631 PDVLRRAQAAGLPPPALLIDTLQRLQL 657



 Score =  154 bits (388), Expect = 9e-41
 Identities = 210/835 (25%), Positives = 313/835 (37%), Gaps = 171/835 (20%)

Query: 625  FEEVFNERQISPQAADRVLMRDFPGLSHRCAREIVEGASSIEMESLTGAGRVPLALAERA 684
            FE +   R+ +     + L R FPGL      E++   S+ E E LT  GRVPL +AE A
Sbjct: 780  FESLQQRRRPTHPPTAQTLARQFPGLPDSALEELLANISNAERERLTN-GRVPLRIAEEA 838

Query: 685  RWAIRDSRIDRACAGLRQAAAENDDTGKLALGLIDAIAPWSAGVNVELPAAGRGGLLQTL 744
            R     +R+DRA  GL + +  NDD+ ++   L  A            P A    LLQ  
Sbjct: 839  RLLQARARLDRALLGLFRPSLANDDSLRIKQALQAAH-----------PQAEPARLLQL- 886

Query: 745  RRQLDSRQRQLLGISQMTDDALGERLGREALADREAAARMIGLARVGQGIRPPVRLFDGR 804
                                         AL DR+  A ++G   +    R P+RL +GR
Sbjct: 887  -----------------------------ALGDRQHCASLLGQQPINPRFRSPLRLANGR 917

Query: 805  LGYPLSGH-LTGTRQALRRTLNHVYPVMSSEQLEAYLQDLAWRGVDPWNHVSQLLQAKVS 863
            LGYPLSG  L G      R L  +YP +SSEQ+     +LA RG D  + ++QL   + +
Sbjct: 918  LGYPLSGRGLQGRALPAARRLRALYPELSSEQITGLQAELA-RGGDLGSAINQLEVEQRT 976

Query: 864  LKQALQAWRNDAGLNIVRRLRRFKVARRITASWQRFTPGEVAGDYHLTLVGERVGELPTL 923
            L + L  W + A   +  R  R +   R+ ++ +R       G    TLV +R+ +L  L
Sbjct: 977  LNRDLNRWVSTA-RTLEERFDRQQCTERLMSASRR-----EGGAQAETLVLDRM-QLEAL 1029

Query: 924  PD-NVSFDHITHLTLRDMQVTSLDAGFLGRF--------------------------SKV 956
            P       HI +L L  +Q+  L+  FL  F                           ++
Sbjct: 1030 PAFTARMPHIRNLRLEGLQMRRLEGSFLTNFPNLETLEIVGNPDIDAETLFEALRSAPRL 1089

Query: 957  RNLDLRNNQLTRLPAGIEQ---------------------------LTE--LRTLRLGGN 987
            R L L +N LT L    +Q                           LT   L  L L  N
Sbjct: 1090 RELGLTDNGLTTLSPTAQQAIGAMPGLRLLWLSRNRLQLDTTSLGFLTRLPLDALGLAHN 1149

Query: 988  QIVLSSEDNLRLSQLVELRRLELNGNPVGLLPPLASFPLLRRLSLRNTGLGELPADLA-- 1045
            QI L      +   ++    L L+GNP+ L P L     L  L L    L + P  L   
Sbjct: 1150 QITLDESLAAQFQDMIHPVLLHLSGNPLQLAPDLRFMARLVHLELERCELQQWPDSLTVL 1209

Query: 1046 ---RHGNLELLDMRDNQIQTLPEALSLVPLRLWRGLELH---------DNPLSDETLQRL 1093
                   L  L++  N+I+TLP+   ++     R +  H          N L  +T    
Sbjct: 1210 MSQPQYQLRYLNLSSNRIRTLPDLPGVLRTPFARDVAAHLPERRWLFNYNTLEAQT---- 1265

Query: 1094 QLARASAGAAERRRVAHATAIPNAAAPWLSGFTPAQREVRLASWNRLNQEAGAQDLFRFF 1153
               RA  G++      HA  +P     W   F           W+ L  +     L    
Sbjct: 1266 ---RARLGSSGVNVFEHAEDVP----LWQGVFRGEASNAEEQLWSDLFDQGENAALLGVL 1318

Query: 1154 SDLRALREYDAQPRDLQARVWHILEACEQHAEVRASLFEQVAR-PRSCSDELLLTLSELE 1212
              L    E       L+ RVW +L+       +R  L       P +C D      S LE
Sbjct: 1319 ERLAQSAEAQRDGEALRTRVWKLLDDAAHDTVLRERLATVAGDFPPTCGDAGADAFSALE 1378

Query: 1213 VGALVAKAGTAGTGLQKERALVRLGRSLFRLDKVNAIAAR-------------------H 1253
            +  L  +A  A     +   L+ L   L+R  +VN +A R                   +
Sbjct: 1379 IEVLAHEA--AAVAGSRPADLLSLYGKLYRRSQVNQLADRISWRRSLRKQALLDGAFDEN 1436

Query: 1254 IADY--------FSN--------DPVEVYLTYRVRLADSLDLPVQPSHLSYESFSGVGRE 1297
            +  Y        F +        D VEV L  R  LA +LD P     + Y + + +   
Sbjct: 1437 LPPYDELDDPSAFPDSELQTGLVDDVEVRLALRQSLASALDYPEPSRGMLYRNTARINDT 1496

Query: 1298 DLDAARSEVLRQETPQ-ALAQALADRTFWQDYLQEQQAARFSRLDEPFQQRLDAL 1351
             ++  ++ VL  +    A  Q L  +  W +YL+ + AA+FS + + ++  LD L
Sbjct: 1497 IIEMVKAAVLSLDRDAIAREQWLTQQPGWVEYLKREHAAQFSLITDFWRPGLDYL 1551