Pairwise Alignments

Query, 257 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 262 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  176 bits (445), Expect = 6e-49
 Identities = 91/239 (38%), Positives = 135/239 (56%)

Query: 19  VGSRATDYPSDWFIEPHSHTKHQLIYAIKGLMIVESGNECWTVPPSRGVWMPCGQVHAIR 78
           V  R    P+      HSH   QL YAI G++ +++    +  PP R VW+P G  H + 
Sbjct: 24  VYGRTESLPNRALTRRHSHPWVQLSYAISGVLEIQTSVGRFVAPPQRAVWIPAGVPHRVF 83

Query: 79  CVGDVKMRSVFVRSDAATGLPLQSKAISISPLLSELIKASVGFTAPFAEDSREARVMRLI 138
                +MRS+++          +   + +S LL ELI++       +AED  + R+ +++
Sbjct: 84  SSPHTEMRSLYLDCSVTAWAVERCHVLEVSSLLRELIRSFSELPVEYAEDGPDGRLAQVV 143

Query: 139 LDEICVLPTLPLKLSQPSDQRLRVICTALHERPEDNATVADWGLRLGVDEKTIQRLFRKE 198
           LD++   P + L L  P D RLR I  +L+ RPE   T++ W  +LGV EKT+ RLF  +
Sbjct: 144 LDQLAAAPQVDLMLPLPLDPRLRHIYRSLNLRPEQQTTLSQWSQKLGVSEKTLSRLFLSD 203

Query: 199 TGMTFGQWRQQARLMQALERIALGERIIDVAGALGYDSPSAFASMFKRQFGTTPSQFFR 257
           TG+TF  WRQ+ RL+ AL  +  GER+ DVA A GY+S SAF + F++QF  TP +FFR
Sbjct: 204 TGLTFRAWRQRLRLLTALPALEQGERVTDVALACGYESTSAFINAFRQQFEATPGEFFR 262