Pairwise Alignments

Query, 257 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 254 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  144 bits (362), Expect = 2e-39
 Identities = 86/239 (35%), Positives = 126/239 (52%), Gaps = 12/239 (5%)

Query: 23  ATDYPSDWFIEPHSHTKHQLIYAIKGLMIVESGNECWTVPPSRGVWMPCGQVHAIRCVGD 82
           A  YP   ++EPHSH   QL+YA+ G+M VE+  E   VPP R VW+P G  H IR V D
Sbjct: 20  ARTYPRGLYVEPHSHDWGQLLYAMSGVMWVETPREALVVPPQRAVWLPPGVAHGIRVVSD 79

Query: 83  VKMRSVFVRSDAATGLPLQSKAISISPLLSELIKASVGFTAPFAEDSREA----RVMRLI 138
           ++MR++++R   A  L  Q + I +  LL ELI      T     DS EA     V+ L 
Sbjct: 80  LQMRNIYLRPALAATLDSQVQVIEVGGLLRELI-----VTLVEEGDSGEAAYYDAVVSLA 134

Query: 139 LDEICVLPTLPLKLSQP--SDQRLRVICTALHERPEDNATVADWGLRLGVDEKTIQRLFR 196
           L E+       ++++ P   D+RL   C A+   P             G   +T+ RLF+
Sbjct: 135 LLELQRARRSQIRIAMPVGVDRRLITACQAIMAAPSLEVAFEHHAETAGASVRTLSRLFQ 194

Query: 197 KETGMTFGQWRQQARLMQALERIALGERIIDVAGALGYDSPSAFASMFKRQFGTTPSQF 255
              GM F +WR+Q +L  A+  +  G+ +  +A +LGY SPS+F+ MF+R+ G  PS +
Sbjct: 195 NNLGMGFAEWRRQVQLATAVAELIQGQSVSAIARSLGY-SPSSFSDMFRRELGVAPSHY 252