Pairwise Alignments

Query, 257 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 241 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  146 bits (368), Expect = 4e-40
 Identities = 81/223 (36%), Positives = 123/223 (55%), Gaps = 1/223 (0%)

Query: 35  HSHTKHQLIYAIKGLMIVESGNECWTVPPSRGVWMPCGQVHAIRCVGDVKMRSVFVRSDA 94
           H+H   QL    +GL ++E+ +  W  PP    W+     HA +  G     S+ + S A
Sbjct: 17  HAHEDGQLFALREGLQVIETPSGRWVQPPGWIGWIAPRCAHAAQSFGPTAGWSLHIDSQA 76

Query: 95  ATGLPLQSKAISISPLLSELIKASVGFTAPFAE-DSREARVMRLILDEICVLPTLPLKLS 153
           A  LP      +++PL+  L+       A     D+R AR++ +++DE+     L L L 
Sbjct: 77  AAVLPDGPHVFAVTPLVLGLVDRLTSLDASAGSLDARRARLVGVLIDELAASERLSLHLP 136

Query: 154 QPSDQRLRVICTALHERPEDNATVADWGLRLGVDEKTIQRLFRKETGMTFGQWRQQARLM 213
            P D+RL ++  AL   P    T+ DW  R+GV  +T+ R F  ETG++F QWRQQARL+
Sbjct: 137 MPQDKRLAMMAAALANDPSLPDTIDDWADRIGVARRTLTRRFAAETGLSFAQWRQQARLL 196

Query: 214 QALERIALGERIIDVAGALGYDSPSAFASMFKRQFGTTPSQFF 256
           +A+E ++L E +  VA  +GY+S SAF   F++ FG TPS+FF
Sbjct: 197 KAVELLSLKEPVTVVALTVGYNSVSAFIEAFRKHFGRTPSRFF 239