Pairwise Alignments

Query, 257 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 292 a.a., HTH-type transcriptional regulator NimR from Azospirillum sp. SherDot2

 Score =  137 bits (344), Expect = 3e-37
 Identities = 71/223 (31%), Positives = 124/223 (55%), Gaps = 1/223 (0%)

Query: 35  HSHTKHQLIYAIKGLMIVESGNECWTVPPSRGVWMPCGQVHAIRCVGDVKMRSVFVRSDA 94
           H H K QL+ A +G ++  + +    VP +  VW+P    H+I      +   VF+ +  
Sbjct: 63  HRHRKGQLVVAAEGSVMCRTLDGLRIVPSNGAVWIPGEIPHSISMSDKGRSYCVFI-NPG 121

Query: 95  ATGLPLQSKAISISPLLSELIKASVGFTAPFAEDSREARVMRLILDEICVLPTLPLKLSQ 154
            + LP      SISP+L E+I         +  +   +R++++ILDE+  +   PL    
Sbjct: 122 ISPLPESCATFSISPMLREMIFHLANLPPLYPLEGPTSRLVQVILDELAQMKAEPLHFPV 181

Query: 155 PSDQRLRVICTALHERPEDNATVADWGLRLGVDEKTIQRLFRKETGMTFGQWRQQARLMQ 214
            +  R++ I   L E P+D  T+ DW   + + E+T+ RL +K+TGM+FG+WRQQ  ++ 
Sbjct: 182 SNHPRIQRIAAQLLEAPDDRRTIRDWAATVAMSERTLARLIQKQTGMSFGRWRQQLHIVI 241

Query: 215 ALERIALGERIIDVAGALGYDSPSAFASMFKRQFGTTPSQFFR 257
           A++R+++G  +  ++  LGYDSPSAF +MF++  G  P ++ +
Sbjct: 242 AVQRMSMGATVQAISQELGYDSPSAFTAMFRKHMGQPPRRYLQ 284