Pairwise Alignments

Query, 257 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 264 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

 Score =  118 bits (295), Expect = 1e-31
 Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 4/234 (1%)

Query: 22  RATDYPSDWFIEPHSHTKHQLIYAIKGLMIVESGNECWTVPPSRGVWMPCGQVHAIRCVG 81
           R   Y +    E       ++ YA+ G+M      + +  PP    W+P   VHA     
Sbjct: 17  RTESYEAGGIFEEKRQPWCKVGYALTGVMEARVEGKRFLCPPHYATWIPADAVHACHNRE 76

Query: 82  DVKMRSVFVRSDAATGLPLQSKAISISPLLSELIK--ASVGFTAPFAEDSREARVMRLIL 139
           +VK  S+++  D   G+P  +  +++SPL+  ++   A    T P  E  R  R+  +++
Sbjct: 77  NVKFVSIYIDRDLCAGMPETACTLALSPLIKAILADFAERRITVPQTEADR--RLAFVLV 134

Query: 140 DEICVLPTLPLKLSQPSDQRLRVICTALHERPEDNATVADWGLRLGVDEKTIQRLFRKET 199
           D++   P     L   +D  L+ +  AL   P D  ++++W   L   EKT+ R F    
Sbjct: 135 DQLLNAPRRESFLPVSNDDLLQPVIDALQADPGDRRSLSEWARLLQTTEKTLSRRFLGHL 194

Query: 200 GMTFGQWRQQARLMQALERIALGERIIDVAGALGYDSPSAFASMFKRQFGTTPS 253
           G++F +WRQ+ +L+ +L  I  G+ +  +A  LGY+SPSAF +MF+R  GT+P+
Sbjct: 195 GVSFNEWRQRLKLVASLSLIEDGKSVQSIAKTLGYNSPSAFIAMFRRLTGTSPT 248