Pairwise Alignments

Query, 167 a.a., putative type 1 pili subunit CsuA/B protein from Pseudomonas putida KT2440

Subject, 316 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 60.1 bits (144), Expect = 3e-14
 Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 21/172 (12%)

Query: 6   AGGLTGVS----VLLAAPLGAVTTST----FTVTAQVVAGCLVVGGVTSYGTLDYGSQSA 57
           AGG T  +     LLA    +VT +     FTV+A V   C++     S   +++GS   
Sbjct: 156 AGGETSFTYTSYTLLAPSCSSVTQNPTQVPFTVSAAVAPTCII-----SAQNINFGSHGV 210

Query: 58  LSTGLLSTSLGGSTVTFQCTPGVAMSMSLDGG-QNSASGTRNLKRTSGTQVLAYQLYRDA 116
           L+T + +       +   CT G+  S++L+GG  NS    R +    G   + Y LYRD 
Sbjct: 211 LNTAVDANG----AINLTCTNGLNYSVALNGGLSNSPPAARQM--VQGAASIIYGLYRDV 264

Query: 117 AYSQALGIGQS-VAVSYSDPTAIKLPVYGRVQLTGTQPAGTYTDVVQVTVTW 167
           + +   G     +A    + +   L V+GRV    T   G Y D V VTV +
Sbjct: 265 SRTNVWGSAAGQIATGTGNGSLQTLTVFGRVPAQNTPAPGNYADTVVVTVNY 316



 Score = 35.0 bits (79), Expect = 1e-06
 Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 22/141 (15%)

Query: 23  VTTSTFTVTAQVVAGCLVVGGVT-SYGTLDYGSQSALSTGLLSTSLGGSTVTFQCTPGVA 81
           +T +   + A  VA  ++    T S   +++G  +      + T+   +T++  C   ++
Sbjct: 4   LTRAALAIAAAFVASPVLAQSCTFSMSDMNFGFVNLAGGAAVDTT---ATLSVTCNNPLS 60

Query: 82  MSMSLD-------GGQNSASGTRNLKRTSGTQVLAYQLYRDAAYSQALGIGQSVAVSYSD 134
           +++S+        GG   + G R + +  G+ +L YQLY+ +A + A G     A+    
Sbjct: 61  LALSIRICPNINAGGGGQSGGIRRMLQ--GSNILNYQLYQTSARTTAWGSVTQPALGAPP 118

Query: 135 PTAIKLP---------VYGRV 146
           P  + LP         VYGR+
Sbjct: 119 PIDMALPLLINSTTRTVYGRI 139