Pairwise Alignments

Query, 755 a.a., putative Phytochrome family protein from Pseudomonas putida KT2440

Subject, 1095 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  163 bits (412), Expect = 5e-44
 Identities = 88/234 (37%), Positives = 134/234 (57%), Gaps = 4/234 (1%)

Query: 517  EELAQLAGELRRSNKELEAFSYSVSHDLRAPLRHIAGYTELLGEIEGQGLSERGKRFLQH 576
            + ++    EL RS +++EA SYS++HDLRAPLR + G+  ++ E E   LS  G+   + 
Sbjct: 864  QRVSARTAELERSMRDMEAISYSIAHDLRAPLRSVNGFASIVLEDEADRLSPTGRDMFER 923

Query: 577  IGEAAHFAGSLVDNLLNFSQMGRSALRLSDVDLNALVEAIRSELAPDYEGRAIVWDIAPL 636
            I  ++   G ++ ++L   ++ R  L    VD++AL +++   L+       I  DI  +
Sbjct: 924  IARSSRNMGQMITDMLELLRVVRVDLEPVPVDMHALAQSVVEALSSQASQARI--DIQAM 981

Query: 637  PKVIGDPAFINMALHNLIANAIKYTRGRTPARIEISAVQHPEETEVCIRDNGVGFDMAYA 696
            P  +GD   +     NLI N +KY+R    A+ E++      +    +RDNG+GFDMA+A
Sbjct: 982  PPAMGDATLLRQVFSNLIDNGLKYSRHL--AQPELAVGFDSRQRAYFVRDNGMGFDMAHA 1039

Query: 697  NKLFGVFQRLHRMEDFEGTGIGLASVRRIIERHDGRVWATGQVDQGASFHFTLP 750
             KLFG+FQRLH   +  G G+GLA V RI+ERH GRVWA     +GA+F   LP
Sbjct: 1040 EKLFGLFQRLHAGSNVPGMGVGLAIVSRIVERHGGRVWAESAPGEGATFWLRLP 1093