Pairwise Alignments

Query, 384 a.a., nitrite transporter, HPP family (from data) from Pseudomonas putida KT2440

Subject, 146 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 32/125 (25%), Positives = 65/125 (52%), Gaps = 7/125 (5%)

Query: 239 ITAASVMSRDVQFATPDTTLEQAWKMLASHHLKTLPVLQHGKLVGIVSLSDLVGPAMQRG 298
           + A    +++V     D T+ +A   ++  ++  LPV+Q G +VGI+S  D     M +G
Sbjct: 8   LKAKDQKNQEVHVIKHDHTVFEALVRMSEKNVGALPVVQDGVVVGIISERDYARKIMLKG 67

Query: 299 RFSWRGLFGRQAVRMAQVMSRRVVSVSSQHPLERLLPLLCEQGLHCLPVLDGDKLVGVIT 358
             S          ++ +VMS  V++V +   ++  + ++ +  L  LPV++  KL+G+++
Sbjct: 68  LSS-------VTTKVHEVMSSPVITVDTHKKVDECMNIMTDSHLRHLPVVENGKLLGLLS 120

Query: 359 QTDLI 363
             DL+
Sbjct: 121 IGDLV 125



 Score = 40.4 bits (93), Expect = 3e-08
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 5/77 (6%)

Query: 224 ILATEQHALQRSLGGITAAS-----VMSRDVQFATPDTTLEQAWKMLASHHLKTLPVLQH 278
           I++   +A +  L G+++ +     VMS  V        +++   ++   HL+ LPV+++
Sbjct: 53  IISERDYARKIMLKGLSSVTTKVHEVMSSPVITVDTHKKVDECMNIMTDSHLRHLPVVEN 112

Query: 279 GKLVGIVSLSDLVGPAM 295
           GKL+G++S+ DLV  A+
Sbjct: 113 GKLLGLLSIGDLVKEAI 129



 Score = 26.6 bits (57), Expect = 4e-04
 Identities = 15/73 (20%), Positives = 33/73 (45%)

Query: 309 QAVRMAQVMSRRVVSVSSQHPLERLLPLLCEQGLHCLPVLDGDKLVGVITQTDLIAGLKR 368
           Q ++     ++ V  +   H +   L  + E+ +  LPV+    +VG+I++ D    +  
Sbjct: 6   QVLKAKDQKNQEVHVIKHDHTVFEALVRMSEKNVGALPVVQDGVVVGIISERDYARKIML 65

Query: 369 QLLSKIEASDNRV 381
           + LS +    + V
Sbjct: 66  KGLSSVTTKVHEV 78