Pairwise Alignments

Query, 384 a.a., nitrite transporter, HPP family (from data) from Pseudomonas putida KT2440

Subject, 375 a.a., Putative transmembrane protein from Variovorax sp. SCN45

 Score =  199 bits (505), Expect = 1e-55
 Identities = 133/372 (35%), Positives = 195/372 (52%), Gaps = 32/372 (8%)

Query: 14  LPASLNIPPKEWLRAGIGALLGLFLAGWLTS-LAYGPSIALHLLGPLAASAVLVFAVHSG 72
           LPA   +  +E LRA  GA LGL +A  L+  LA     ++ L+ PL ASAVLVFAV + 
Sbjct: 14  LPARTTVDARERLRAVCGAGLGLLVAALLSHWLATPLHASVWLIAPLGASAVLVFAVPAS 73

Query: 73  PLAQPWPVLGSYALAGAVGLAMREGFGPELWVAAAALGISILVMCLLRCLHPPGGGVAVS 132
           PLAQPW V+G   L+  VG+A           AA A+ ++I +M   RCLHPPGG  A+ 
Sbjct: 74  PLAQPWSVIGGNTLSAVVGIACANWIPEPTIAAAVAVALAIALMFSARCLHPPGGAAALL 133

Query: 133 AVLADPGLTALGDHLLEPVLLNALILVTVAIAYNRLTGVRYPKGALPRKDLHHTHDPLPG 192
           AVL     T      L P   N+L+LV   + YN LTG RYP   + R          P 
Sbjct: 134 AVLTH---TTHFSSALFPFFTNSLLLVLAGVLYNTLTGRRYPHVQVARP---------PA 181

Query: 193 ERVGIRSEDLDLALEELGEFVDVSRDELERIILATEQHALQRSLGGITAASVMSRD---V 249
                   D+D  L    + +D+SRD+LE +I  TE  + +R LG +  A +MSR+   V
Sbjct: 182 ADARFSQADIDAVLARYNQVLDISRDDLESLIQQTELESYKRRLGTLHCADIMSREPISV 241

Query: 250 QFATPDTTLEQAWKMLASHHLKTLPVLQH-GKLVGIVSLSDL-----------VGPAMQR 297
           +F TP   L++AW ++    +K LP+     ++VGIV+ +D            +   ++ 
Sbjct: 242 EFGTP---LQEAWALMHERRIKALPITDRTRRVVGIVTQADFFRQLDLQHHEGIAGKLRD 298

Query: 298 GRFSWRGLFGRQAVRMAQVMSRRVVSVSSQHPLERLLPLLCEQGLHCLPVLDGDK-LVGV 356
              + R +   +   + Q+M+R+V   S+  P+  L+PL  E G H +P++DG+K L G+
Sbjct: 299 LIRATRTVMSNKPEVVGQIMTRQVRVASADRPVVDLVPLFSEGGHHHIPIIDGEKRLAGM 358

Query: 357 ITQTDLIAGLKR 368
           ITQ+D +  L R
Sbjct: 359 ITQSDFVRALYR 370