Pairwise Alignments

Query, 228 a.a., putative ABC transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 236 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Variovorax sp. SCN45

 Score =  258 bits (660), Expect = 5e-74
 Identities = 134/226 (59%), Positives = 171/226 (75%)

Query: 2   SPSILVAQNLSKVVPSAEGDLTILHALSLDLAQGDSLAIVGASGSGKSTLLGLLAGLDRP 61
           S +I+  +++ K V  + G L IL  +   L   ++ AIVGASGSGKSTLL ++AGLD P
Sbjct: 6   SDAIVAVEHVFKSVTDSAGTLDILQDIHFTLGARETAAIVGASGSGKSTLLSIIAGLDTP 65

Query: 62  SAGSVMLAGHDLGPLDEDQRARVRAEHVGFVFQSFQLLDSLNALENVMLPLELDGRRDAR 121
           + G+V LAG DL  +DED+RA VRA+ VGFVFQSFQLL +L+ALENVMLPLEL  R+DAR
Sbjct: 66  TRGTVRLAGDDLFAIDEDERAAVRAQRVGFVFQSFQLLGNLSALENVMLPLELANRKDAR 125

Query: 122 EQARTLLERVGLGKRLSHTPRQLSGGEQQRVAIARAFAAQPAVLFADEPTGNLDSHTGER 181
           + A  +L RVGLG+RL H P+ LSGGEQQRVA+ARAF  QPA+L ADEPTG+LD  TGE+
Sbjct: 126 KAATEMLGRVGLGQRLGHYPKVLSGGEQQRVALARAFVVQPALLLADEPTGSLDFATGEQ 185

Query: 182 ISDLLFELNKERGTTLVLVTHDERLARRCRRQIRLDAGRLVAPMEA 227
           +  L+F+LN+E GTTLVLVTHD  +A RC R+I ++AGR+    +A
Sbjct: 186 VMKLMFDLNRELGTTLVLVTHDRGIADRCERRITIEAGRVAGNEKA 231