Pairwise Alignments

Query, 492 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  231 bits (588), Expect = 8e-65
 Identities = 146/357 (40%), Positives = 196/357 (54%), Gaps = 16/357 (4%)

Query: 149 LMLAMLGASQLLIRFLLSQLNT-------------LKDVMLHVEKTGDLSARVPLASGDE 195
           L   ++GA+  L+  LL  L               LKD+       GDL+ R+  A  DE
Sbjct: 359 LKALLVGAAAALLGLLLIWLTATGVTRPINNVAAMLKDI---ASGDGDLTQRLAYAKKDE 415

Query: 196 VGQMAGAFNAMQSTYHRVVSTVAHSAAQLDSGAARLAASMSDVRHGMLGQQSETDQAATA 255
           +G++A  FN         ++ +  S  +    A + +A       GM  Q  E DQ ATA
Sbjct: 416 LGELANWFNRFLDKLQPTIAQIKQSITEARGTADQSSAIARQTSEGMQVQFREIDQVATA 475

Query: 256 INEMSATVHHIAQHAGATRDLSQTADTLAGSGQAVVSRVQDSISGLSSGVQQTAEMIRQL 315
            NEMSAT H +A  A      ++ AD  A  G +++ +    I+ L+  V +    +  L
Sbjct: 476 SNEMSATAHDVANSASNAASAARGADQSAREGMSIIEQSTRDITSLAEEVSKAVGEVEAL 535

Query: 316 AEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGDLGRGFAVVADEVRNLAKRVQTST 375
           A +S++I  V+ VI SIAEQTNLLALNAAIEAARAG+ GRGFAVVADEVRNLAKR Q S 
Sbjct: 536 AVNSEQIGSVLEVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRNLAKRTQDSV 595

Query: 376 DEITTMVSALQSGTRDAVEFMQESSYKADDCVRQAQEAGEALAEITGAVAQMRESNTQIA 435
           +EI  ++  +QSGTR  V  M  S  +A     Q  +A +AL +I+ AV  + + N QIA
Sbjct: 596 EEIRLVIERIQSGTRGVVATMHSSQSQAQSNAGQIHQAAQALGKISDAVTVISDMNLQIA 655

Query: 436 VAAEQQSQVAEEMNRAVVSIRDVTERTVQQTVGSATTSSELATLAGELNKAIGQLKL 492
            AAEQQS VAEE+NR V +IR VTE    Q   SA  SS+L  LA +  K + Q ++
Sbjct: 656 SAAEQQSAVAEEVNRNVSAIRTVTETLTGQATESAAISSQLNALASQQMKLMDQFRV 712