Pairwise Alignments

Query, 492 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 493 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  738 bits (1906), Expect = 0.0
 Identities = 395/493 (80%), Positives = 439/493 (89%), Gaps = 1/493 (0%)

Query: 1   MGAWLSNVSLKYKFWAVNAVAFVTTLLLVLYAVHLEQRARAEAAQAQAAAQAQLLAAWPA 60
           MGAWLSN+SLKYKFWAVNAVAF+TTLLLVLYAV LEQ+AR+ A+ A A AQA+LL AWPA
Sbjct: 1   MGAWLSNISLKYKFWAVNAVAFITTLLLVLYAVQLEQQARSTASHASAQAQARLLDAWPA 60

Query: 61  GQALPRPANVISWSTGQTPTYAGEALDALRNAQGWVALPSAWILGENPPRGAQVLRNGD- 119
           G+ LP+  + +++  GQ P  A + L AL +A GWV      + G+NP  GA+V+   D 
Sbjct: 61  GETLPKGEHWLTFKRGQIPQLADQDLSALGSATGWVEFNPMPVFGDNPLLGAEVVARPDG 120

Query: 120 QQLAVLAQSPSLRQVFFDRFSNYAVCVLILMLAMLGASQLLIRFLLSQLNTLKDVMLHVE 179
           Q +AVLA +PSL QVF +RF+NYAV VLILMLAMLGASQLLIRFLLSQLNTLKDVMLHVE
Sbjct: 121 QYIAVLAYAPSLSQVFEERFANYAVAVLILMLAMLGASQLLIRFLLSQLNTLKDVMLHVE 180

Query: 180 KTGDLSARVPLASGDEVGQMAGAFNAMQSTYHRVVSTVAHSAAQLDSGAARLAASMSDVR 239
           KTGDLSARVPLA  DEVGQMA AFNAMQ+ Y RVV+TVAH+A QLD GAARLA+SM++V+
Sbjct: 181 KTGDLSARVPLACKDEVGQMASAFNAMQAGYQRVVNTVAHTARQLDDGAARLASSMNEVQ 240

Query: 240 HGMLGQQSETDQAATAINEMSATVHHIAQHAGATRDLSQTADTLAGSGQAVVSRVQDSIS 299
           HGMLGQQSETDQAATAINEM+ATVHHIAQHAGATRDLSQTADTLAGSGQ VV+RVQ SI+
Sbjct: 241 HGMLGQQSETDQAATAINEMTATVHHIAQHAGATRDLSQTADTLAGSGQEVVTRVQRSIA 300

Query: 300 GLSSGVQQTAEMIRQLAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGDLGRGFAV 359
           GLS+GVQQTA MI++LAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAG++GRGFAV
Sbjct: 301 GLSTGVQQTAVMIQKLAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGEMGRGFAV 360

Query: 360 VADEVRNLAKRVQTSTDEITTMVSALQSGTRDAVEFMQESSYKADDCVRQAQEAGEALAE 419
           VADEVRNLAKRVQ+STDEIT MVSALQ+GTRDAV+FMQESS+KADDCV QAQEAG ALAE
Sbjct: 361 VADEVRNLAKRVQSSTDEITRMVSALQAGTRDAVDFMQESSFKADDCVHQAQEAGAALAE 420

Query: 420 ITGAVAQMRESNTQIAVAAEQQSQVAEEMNRAVVSIRDVTERTVQQTVGSATTSSELATL 479
           ITGAVAQMRESNTQIAVAAEQQS VAEEMNRAVVSIRDVTE TVQQTV SATTS++LATL
Sbjct: 421 ITGAVAQMRESNTQIAVAAEQQSHVAEEMNRAVVSIRDVTENTVQQTVDSATTSNQLATL 480

Query: 480 AGELNKAIGQLKL 492
           AGEL+KAIGQLKL
Sbjct: 481 AGELSKAIGQLKL 493