Pairwise Alignments

Query, 798 a.a., DNA-binding, ATP-dependent protease from Pseudomonas putida KT2440

Subject, 806 a.a., Lon protease from Pseudomonas simiae WCS417

 Score =  536 bits (1382), Expect = e-156
 Identities = 310/768 (40%), Positives = 458/768 (59%), Gaps = 18/768 (2%)

Query: 9   LLPLRDVVVYPHMVIPLFVGREKSIEALEAAMTGEKQILLLAQKNPADDDPGE---DALY 65
           ++P+ +   +P  V+P+ V  E   E LE     +   L L   +   +DP      AL 
Sbjct: 43  IIPIHNRPFFPAQVLPVIVNEEPWAETLELVSKSDHHSLALFFMDTPPEDPRHFDTSALP 102

Query: 66  RVGTVATVLQLLKLPDGTVKVLVEGEQRGAVERFSEVEGHIR----AEVSLIDETDTAER 121
             GT+  V    +  +G ++ + +G  R  ++ + +   H R     EV    +      
Sbjct: 103 LYGTLVKVHHASR-ENGKLQFVAQGLTRVRIKTWLK---HHRPPYLVEVEYPHQPSEPTD 158

Query: 122 ESEVFVRTLLSQFEQYVQLGKKVPAEVLSSLN--SIDEPGRLVDTMAAHMALKIEQKQEI 179
           E + +   L++  ++ + L      E+ + LN  S ++P  L D  AA  +    + QE+
Sbjct: 159 EVKAYGMALINAIKELLPLNPLYSEELKNYLNRFSPNDPSPLTDFAAALTSATGNELQEV 218

Query: 180 LEIVDLTTRVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELG- 238
           L+ V +  R+E VL +L  E+++ +++K +   V +++   QRE++L EQ+K IQ+ELG 
Sbjct: 219 LDCVPMLKRMEKVLPMLRKEVEVARLQKELSAEVNRKIGEHQREFFLKEQLKVIQQELGL 278

Query: 239 DGDEGHNEVEELKKRIEAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRSYLDWLVQVP 298
             D+   +VE+ ++R+E   LP  A  +   ELNKL  +   S E  V R+YLDW   VP
Sbjct: 279 TKDDRSADVEQFEQRLEGKALPAQAKKRIDEELNKLSILETGSPEYAVTRNYLDWATSVP 338

Query: 299 WKAQSKVRLDLAKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGK 358
           W    + +LDL  A ++LD  H GL+++K RILE+LAV     ++ G ++ LVGPPGVGK
Sbjct: 339 WGVYGEDKLDLKHARKVLDKHHAGLDDIKSRILEFLAVGAYKGEVAGSIVLLVGPPGVGK 398

Query: 359 TSLAESIAAATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLL 418
           TS+ +SIA +  R F R ++GG+RDEAEI+GHRRTYIG+MPG+L+Q +  V V NP+ +L
Sbjct: 399 TSVGKSIAESLGRPFYRFSVGGMRDEAEIKGHRRTYIGAMPGKLVQALKDVEVMNPVIML 458

Query: 419 DEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSNSM-NIPPAL 477
           DEIDKMG   +GDPASALLE LDPEQN  F DHYL++  DLS V+F+CT+N++ +IP  L
Sbjct: 459 DEIDKMGQSFQGDPASALLETLDPEQNVEFLDHYLDLRLDLSKVLFVCTANTLDSIPGPL 518

Query: 478 LDRMEVIRLPGYTEDEKINIAVKYLVPKQVKANGLKKEELEVDVSAIRDIIRYYTREAGV 537
           LDRMEVIRL GY  +EK+ IA ++L PKQ++  G+ K  L +   A+R +I  Y REAGV
Sbjct: 519 LDRMEVIRLSGYITEEKVAIAKRHLWPKQLEKAGVSKNTLTISDGALRALIDGYAREAGV 578

Query: 538 RGLERQIAKVCRKVVKEHTGQKQVKVKVASEQLEHLLGVRKFRYGLAEQQDQIGQVTGLA 597
           R LE+Q+ K+ RK V +   +    +K+ ++ LE  LGV  FR    +     G +TGLA
Sbjct: 579 RQLEKQLGKLVRKAVVKLLDEPDSVIKIGNKDLESSLGVPVFRN--EQVLSGTGVITGLA 636

Query: 598 WTQVGGELLTIEAVVIPGKGQLIK-TGSLGDVMVESITAAQTVVRSRARSLGIAADFHEK 656
           WT +GG  L IEA  I    +  K TG LG+VM ES   A + + S  +S G    F ++
Sbjct: 637 WTSMGGATLPIEATRIHTLNRGFKLTGQLGEVMKESAEIAYSYISSNLKSFGGDPKFFDE 696

Query: 657 HDVHIHMPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGGLKE 716
             VH+H+PEGATPKDGPSAG+ M +AL+S     P +  VAMTGE+TL G VL IGG++E
Sbjct: 697 AFVHLHVPEGATPKDGPSAGVTMASALLSLARNQPPKKGVAMTGELTLTGHVLPIGGVRE 756

Query: 717 KLLAAHRGGIKTVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQI 764
           K++AA R  I  +I+PE N    +E+PE +K+ + +   K   +V ++
Sbjct: 757 KVIAARRQKIHELILPEPNRGSFEELPEYLKEGMTVHFAKRFADVAKV 804