Pairwise Alignments

Query, 798 a.a., DNA-binding, ATP-dependent protease from Pseudomonas putida KT2440

Subject, 810 a.a., ATP-dependent protease La (EC 3.4.21.53) Type I from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 1027 bits (2656), Expect = 0.0
 Identities = 513/787 (65%), Positives = 647/787 (82%), Gaps = 8/787 (1%)

Query: 3   TTLDLPLLPLRDVVVYPHMVIPLFVGREKSIEALEAAMTGEKQILLLAQKNPADDDPGED 62
           T ++LPLLPLRDVVV+PHMVIPLFVGR KSI+ALE+AM  E++I+L+AQK  A D+P  D
Sbjct: 10  TPVELPLLPLRDVVVFPHMVIPLFVGRPKSIKALESAMEAERRIMLVAQKAAAKDEPSPD 69

Query: 63  ALYRVGTVATVLQLLKLPDGTVKVLVEGEQRGAVERFSEVEGHIRAEVSLID----ETDT 118
            ++ +G VAT+LQ+LKLPDGTVKVLVEG QR  V    + E H  A V+ +D      D 
Sbjct: 70  DMFEMGCVATILQMLKLPDGTVKVLVEGVQRAKVLTIRDGENHFIASVNPVDPAVERADM 129

Query: 119 AERESEVFVRTLLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQE 178
              E E   R ++ QF+QYV+L KK+P+E+L+S++SID+PGRL DT+AAH+ LK+E KQ 
Sbjct: 130 QSNELEALRRAVMQQFDQYVKLNKKIPSEILTSISSIDDPGRLADTIAAHLPLKLESKQV 189

Query: 179 ILEIVDLTTRVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELG 238
           +L++  +  R+E++   L+ E+D+L V+K+IRGRVK+QME++QR++YLNEQ+KAIQKELG
Sbjct: 190 VLDLDPVNKRLENLFEQLEREVDILNVDKKIRGRVKRQMEKNQRDFYLNEQVKAIQKELG 249

Query: 239 DGDEGHNEVEELKKRIEAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRSYLDWLVQVP 298
           +G+EG  ++EE++K+I+AA +P +A  KA AE  KLK MSPMSAEATVVR+Y+D LV +P
Sbjct: 250 EGEEGA-DIEEIEKKIKAAKMPAEARKKADAEFKKLKLMSPMSAEATVVRNYIDALVGLP 308

Query: 299 WKAQSKVRLDLAKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGK 358
           W  ++K++ DLA AE +L+ DHYGLE+VK+RILEYLAVQ+RV K++ P+LCLVGPPGVGK
Sbjct: 309 WSKKTKIKHDLAHAEAVLNEDHYGLEKVKDRILEYLAVQQRVDKVKAPILCLVGPPGVGK 368

Query: 359 TSLAESIAAATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLL 418
           TSL +S+A AT RK+VRMALGG+RDEAEIRGHRRTYIG+MPG+++Q + KVG RNPLFLL
Sbjct: 369 TSLGQSVAKATGRKYVRMALGGMRDEAEIRGHRRTYIGAMPGKVLQSLNKVGTRNPLFLL 428

Query: 419 DEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSNSMNIPPALL 478
           DEIDK+G+D RGDP+SALLEVLDPEQNH F DHY+EVD+DLSDVMF+ TSNSMNIPPALL
Sbjct: 429 DEIDKLGTDFRGDPSSALLEVLDPEQNHTFGDHYIEVDFDLSDVMFVATSNSMNIPPALL 488

Query: 479 DRMEVIRLPGYTEDEKINIAVKYLVPKQVKANGLKKEELEVDVSAIRDIIRYYTREAGVR 538
           DRMEVIRL GYTEDEK NIA++YL+PKQ+K NG+++ EL+V   A+RDI+RYYTREAGVR
Sbjct: 489 DRMEVIRLSGYTEDEKTNIAIRYLLPKQIKNNGIREGELDVRDDAVRDIVRYYTREAGVR 548

Query: 539 GLERQIAKVCRKVVKEHTGQK-QVKVKVASEQLEHLLGVRKFRYGLAEQQDQIGQVTGLA 597
            LER+++K+CRKVVK    +K    V V+++ L   LGVRK+ YG AE Q+Q+GQV GLA
Sbjct: 549 SLERELSKICRKVVKGLLLKKYSPTVVVSADNLSEFLGVRKYSYGRAEAQNQVGQVVGLA 608

Query: 598 WTQVGGELLTIEAVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIAADFHEKH 657
           WT+VGG+LLTIE  ++PGKG + +TGSLGDVM ES+ AA+TVVRSRAR LGI  +  +K 
Sbjct: 609 WTEVGGDLLTIEVAIMPGKGVITRTGSLGDVMKESVEAARTVVRSRARMLGIKDEQFDKR 668

Query: 658 DVHIHMPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGGLKEK 717
           D+HIH+P+GATPKDGPSAG  M TALVS+LT IPVRADVAMTGEITLRG+V AIGGLKEK
Sbjct: 669 DIHIHVPDGATPKDGPSAGAAMTTALVSSLTGIPVRADVAMTGEITLRGEVTAIGGLKEK 728

Query: 718 LLAAHRGGIKTVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQYAPEPL--PD 775
           LLAA RGGIKTVIIPEENV+DL EIP+N+KQ L+I PVKWID+VL IAL+  P PL   +
Sbjct: 729 LLAALRGGIKTVIIPEENVKDLAEIPDNVKQGLEIVPVKWIDKVLAIALERQPVPLTEEE 788

Query: 776 VAPEIVA 782
           VA +I A
Sbjct: 789 VAAQIAA 795