Pairwise Alignments

Query, 798 a.a., DNA-binding, ATP-dependent protease from Pseudomonas putida KT2440

Subject, 784 a.a., ATP-dependent protease La (EC 3.4.21.53) Type I from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 1066 bits (2757), Expect = 0.0
 Identities = 538/767 (70%), Positives = 640/767 (83%), Gaps = 1/767 (0%)

Query: 5   LDLPLLPLRDVVVYPHMVIPLFVGREKSIEALEAAMTGEKQILLLAQKNPADDDPGEDAL 64
           +++P+LPLRDVVVYPHMVIPLFVGREKSI  LEAAM  +K+I+L+AQK  + D+PG + L
Sbjct: 9   IEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEASTDEPGVNDL 68

Query: 65  YRVGTVATVLQLLKLPDGTVKVLVEGEQRGAVERFSEVEGHIRAEVSLIDETDTAERESE 124
           + VGTVA++LQ+LKLPDGTVKVLVEG QR  +   S+   H  A+   +D     ERE E
Sbjct: 69  FTVGTVASILQMLKLPDGTVKVLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQE 128

Query: 125 VFVRTLLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIVD 184
           V VRT +SQFE Y++L KK+P EVL+SLNSID+P RL DT+AAHM LK+  KQ +LE+ D
Sbjct: 129 VLVRTAISQFEGYIKLNKKIPPEVLTSLNSIDDPARLADTIAAHMPLKLADKQSVLEMSD 188

Query: 185 LTTRVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDGDEGH 244
           +  R+E+++A++++EIDLLQVEKRIR RVKKQME+SQREYYLNEQMKAIQKELG+ D+  
Sbjct: 189 VNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMDDAP 248

Query: 245 NEVEELKKRIEAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRSYLDWLVQVPWKAQSK 304
           +E E LK++I+AA +PK+A  KA+AEL KLK MSPMSAEATVVR Y+DW+VQVPW A+SK
Sbjct: 249 DENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPWNARSK 308

Query: 305 VRLDLAKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAES 364
           V+ DL +A+EILD DHYGLE VK+RILEYLAVQ RV KI+GP+LCLVGPPGVGKTSL +S
Sbjct: 309 VKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQS 368

Query: 365 IAAATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDKM 424
           IA AT RK++RMALGGVRDEAEIRGHRRTYIGSMPG+LIQKM KVGV+NPLFLLDEIDKM
Sbjct: 369 IAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKM 428

Query: 425 GSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSNSMNIPPALLDRMEVI 484
            SDMRGDPASALLEVLDPEQN  F+DHYLEVDYDLSDVMF+ TSNSMNIP  LLDRMEVI
Sbjct: 429 SSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSNSMNIPAPLLDRMEVI 488

Query: 485 RLPGYTEDEKINIAVKYLVPKQVKANGLKKEELEVDVSAIRDIIRYYTREAGVRGLERQI 544
           RL GYTEDEK+NIA ++L+PKQ++ N LKK EL VD SAI  IIRYYTREAGVR LER+I
Sbjct: 489 RLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRSLEREI 548

Query: 545 AKVCRKVVKEHTGQKQVK-VKVASEQLEHLLGVRKFRYGLAEQQDQIGQVTGLAWTQVGG 603
           +K+CRK VK+    K +K +++  + L   LGV++F YG A+ ++++GQVTGLAWT+VGG
Sbjct: 549 SKLCRKAVKQLLLDKSLKHIEINGDNLHDYLGVQRFDYGRADSENRVGQVTGLAWTEVGG 608

Query: 604 ELLTIEAVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIAADFHEKHDVHIHM 663
           +LLTIE   +PGKG+L  TGSLG+VM ESI AA TVVR+RA  LGI  DF+EK D+H+H+
Sbjct: 609 DLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKRDIHVHV 668

Query: 664 PEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHR 723
           PEGATPKDGPSAGI MCTALVS LT  PVRADVAMTGEITLRGQVL IGGLKEKLLAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728

Query: 724 GGIKTVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQYAP 770
           GGIKTV+IP EN RDL+EIP+N+  DL I PVK I+EVL +ALQ  P
Sbjct: 729 GGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEP 775