Pairwise Alignments

Query, 798 a.a., DNA-binding, ATP-dependent protease from Pseudomonas putida KT2440

Subject, 805 a.a., ATP-dependent protease LA from Agrobacterium fabrum C58

 Score =  936 bits (2419), Expect = 0.0
 Identities = 469/766 (61%), Positives = 595/766 (77%)

Query: 8   PLLPLRDVVVYPHMVIPLFVGREKSIEALEAAMTGEKQILLLAQKNPADDDPGEDALYRV 67
           P+LPLRD+VV+PHM++PLFVGREKSI ALE  M  +KQI+L+ Q N +DDDP  +A+++V
Sbjct: 14  PVLPLRDIVVFPHMIVPLFVGREKSIRALEEVMGSDKQIMLVTQINASDDDPAPEAIHKV 73

Query: 68  GTVATVLQLLKLPDGTVKVLVEGEQRGAVERFSEVEGHIRAEVSLIDETDTAERESEVFV 127
           GTVA VLQLLKLPDGTVKVLVEG+ R  ++ ++  E    A  + + E      E E   
Sbjct: 74  GTVANVLQLLKLPDGTVKVLVEGKGRAQIDSYTGREDFYEASATPLQEPAEDPVEIEALS 133

Query: 128 RTLLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIVDLTT 187
           R+++S+FE YV+L KK+  EV+ +   ID+  +L DT+A+H+++KI +KQE+LE V +  
Sbjct: 134 RSVVSEFESYVKLNKKISPEVVGAAGQIDDYSKLADTVASHLSIKITEKQEMLETVSVKQ 193

Query: 188 RVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDGDEGHNEV 247
           R+E  L  ++ EI +LQVEKRIR RVK+QME++QREYYLNEQMKAIQKELGDG++G +E+
Sbjct: 194 RLEKALGFMEGEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQKELGDGEDGRDEM 253

Query: 248 EELKKRIEAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRSYLDWLVQVPWKAQSKVRL 307
            EL++RI    L K+A  KA AE+ KL+QMSPMSAEATVVR+YLDWL+ +PW  +SK++ 
Sbjct: 254 AELEERIAKTKLSKEAKEKADAEMKKLRQMSPMSAEATVVRNYLDWLLGLPWGKKSKIKT 313

Query: 308 DLAKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAESIAA 367
           DL  AE ILD DH+GL++VKERI+EYLAVQ R  KIRGP+LCLVGPPGVGKTSLA+SIA 
Sbjct: 314 DLNAAETILDQDHFGLDKVKERIVEYLAVQARATKIRGPILCLVGPPGVGKTSLAKSIAK 373

Query: 368 ATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDKMGSD 427
           AT R++VRMALGGVRDEAEIRGHRRTYIGSMPG+++Q M K    NPLFLLDEIDKMG D
Sbjct: 374 ATGREYVRMALGGVRDEAEIRGHRRTYIGSMPGKIVQSMKKAKKANPLFLLDEIDKMGMD 433

Query: 428 MRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSNSMNIPPALLDRMEVIRLP 487
            RGDP+SALLEVLDPEQN  F DHYLEV+YDLSDVMF+ T+N++NIP  L+DRMEVIR+ 
Sbjct: 434 FRGDPSSALLEVLDPEQNSTFMDHYLEVEYDLSDVMFVTTANTLNIPGPLMDRMEVIRIA 493

Query: 488 GYTEDEKINIAVKYLVPKQVKANGLKKEELEVDVSAIRDIIRYYTREAGVRGLERQIAKV 547
           GYTEDEK  IA ++L+PK +K + L+ EE  V   A+  I + YTREAGVR  ER++ K+
Sbjct: 494 GYTEDEKREIAKRHLLPKAIKEHALRPEEFSVSDDALMAISQQYTREAGVRNFERELMKL 553

Query: 548 CRKVVKEHTGQKQVKVKVASEQLEHLLGVRKFRYGLAEQQDQIGQVTGLAWTQVGGELLT 607
            RK V E    K   V V +  +E  LG+ +FR+G AE++DQ+G VTGLAWT+VGGELLT
Sbjct: 554 ARKAVTEIIKGKSTSVAVTAANIEDYLGIPRFRHGEAEREDQVGVVTGLAWTEVGGELLT 613

Query: 608 IEAVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIAADFHEKHDVHIHMPEGA 667
           IE V++PGKG++  TG+L +VM ESI+AA + VRSRA   GI     +K D+H+H+PEGA
Sbjct: 614 IEGVMMPGKGRMTVTGNLKEVMKESISAAASYVRSRAVDFGIEPPRFDKSDIHVHVPEGA 673

Query: 668 TPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIK 727
           TPKDGPSAG+ M TA+VS +T IPV  DVAMTGEITLRG+VL IGGLKEKLLAA RGGIK
Sbjct: 674 TPKDGPSAGVAMATAIVSIMTGIPVSKDVAMTGEITLRGRVLPIGGLKEKLLAALRGGIK 733

Query: 728 TVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQYAPEPL 773
            V+IPEEN +DL EIP+N+K +++I PV  + EV++ AL   PEP+
Sbjct: 734 KVLIPEENAKDLAEIPDNVKNEMEIIPVSRMGEVIKHALIRQPEPI 779