Pairwise Alignments

Query, 442 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Pseudomonas putida KT2440

Subject, 442 a.a., ATP-dependent hsl protease ATP-binding subunit HslU from Variovorax sp. SCN45

 Score = 97.1 bits (240), Expect = 1e-24
 Identities = 75/251 (29%), Positives = 122/251 (48%), Gaps = 42/251 (16%)

Query: 82  SPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKGDEVELGKSNILLIGPTGSG 141
           +P+EI   LD +++GQ  AK+ +A+A+ N ++R    DK   E+     NIL+IGPTG G
Sbjct: 4   TPQEIVSELDNHIVGQPAAKRAVAIALRNRWRRQQVDDKLRHEIT--PKNILMIGPTGVG 61

Query: 142 KTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYID 201
           KT +A  LARL + PF   +AT  TE GYVG+DV++II+ L          A++ +    
Sbjct: 62  KTEIARRLARLADAPFIKVEATKFTEVGYVGKDVDSIIRDL----------AEIAV---- 107

Query: 202 EIDKISRKSDNPSI---TRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQ---- 254
              K +R+S++  +     D + E +   LL    G   + P        +Q F +    
Sbjct: 108 ---KQTRESESAKVRARAEDAAEERILDVLLPPARGADGAPPALDAPNPTRQAFRKKLRE 164

Query: 255 ------------VDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEGKKVGES 302
                        +TR  L I G A  G+E++ +    +G  G   + + K    K+GE+
Sbjct: 165 HQLDDKEIELDLAETRTPLEIMGPA--GMEEMTE--QLRGMFGQMGQGKRKTRKLKIGEA 220

Query: 303 LREVEPDDLVK 313
           +R +  ++  K
Sbjct: 221 MRLLVDEEAAK 231



 Score = 77.4 bits (189), Expect = 8e-19
 Identities = 83/322 (25%), Positives = 137/322 (42%), Gaps = 74/322 (22%)

Query: 114 RLNQRDKKGDEVELGKSN--ILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYV 171
           R +Q D K  E++L ++   + ++GP G     + E   +L  +   +      T    +
Sbjct: 163 REHQLDDKEIELDLAETRTPLEIMGPAG-----MEEMTEQLRGMFGQMGQGKRKTRKLKI 217

Query: 172 GEDVENIIQKLLQKCDYDVE--------KAQMGIVYIDEIDKISRKSDNPSITRDVSGEG 223
           GE +  ++ +   K   + E          Q GIV+IDEIDK++ +S+      DVS +G
Sbjct: 218 GEAMRLLVDEEAAKLVNEDEIRAQAITNAEQNGIVFIDEIDKVATRSEAQG--SDVSRQG 275

Query: 224 VQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGG 283
           VQ+ LL L+EGT  +            ++  V T ++LFI  GAF  L K          
Sbjct: 276 VQRDLLPLVEGTAVTT-----------KYGVVRTDHMLFIASGAFH-LSK---------- 313

Query: 284 IGFGAEVRSKEEGKKVGESLREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILT 343
                                   P DL     IPE  GR P+   L  L  +    ILT
Sbjct: 314 ------------------------PSDL-----IPELQGRFPIRVELQSLSVSDFESILT 344

Query: 344 EPKNALTKQYAKLFEMESVDLEFRSDALKAVARKALE-----RKTGARGLRSILEGVLLD 398
           + + +L KQY  L   E V L+F  + +  +A  A E        GAR L +++E +L +
Sbjct: 345 QTRASLVKQYQALLATEGVTLDFTPEGVNRLATIAFEVNERTENIGARRLSTVMERLLDE 404

Query: 399 TMYEIPSKKDVSKVVIDESVIE 420
             ++  ++ +   + ID + ++
Sbjct: 405 VSFD-ATRLEGQSIRIDAAYVD 425