Pairwise Alignments

Query, 442 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Pseudomonas putida KT2440

Subject, 448 a.a., ATP-dependent protease ATPase subunit HslU from Azospirillum sp. SherDot2

 Score = 95.5 bits (236), Expect = 3e-24
 Identities = 49/103 (47%), Positives = 69/103 (66%), Gaps = 2/103 (1%)

Query: 82  SPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKGDEVELGKSNILLIGPTGSG 141
           SP+EI   LD+Y++GQ  AK+ +A+A+ N ++R  Q+  +G   E+   NIL+IGPTG G
Sbjct: 16  SPREIVSELDRYIVGQNEAKRAVAIALRNRWRR--QQLPEGLREEVLPKNILMIGPTGVG 73

Query: 142 KTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 184
           KT +A  LARL   PF   +AT  TE GYVG DVE I++ L++
Sbjct: 74  KTEIARRLARLAQAPFLKVEATKFTEVGYVGRDVEQIVRDLVE 116



 Score = 94.4 bits (233), Expect = 7e-24
 Identities = 90/286 (31%), Positives = 129/286 (45%), Gaps = 71/286 (24%)

Query: 141 GKTLLAETLARLLNVPFTIADATTLTEAGYVGE--DVENIIQKLLQKCDYDVEKAQMGIV 198
           GK +   T  R +    T+A++ T+  A    +  D E ++ + ++  +      Q GIV
Sbjct: 209 GKMMGGRTKTRRM----TVAESHTVLMAEESDKLLDQEKVVAEAIRAVE------QNGIV 258

Query: 199 YIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTR 258
           ++DEIDKIS +SD      DVS EGVQ+ LL LIEGT  S       KH       V T 
Sbjct: 259 FLDEIDKISARSDARGA--DVSREGVQRDLLPLIEGTTVST------KHGP-----VKTD 305

Query: 259 NILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEGKKVGESLREVEPDDLVKFGLIP 318
           ++LFI  GAF                                      +P DL     +P
Sbjct: 306 HVLFIASGAF-----------------------------------HIAKPSDL-----LP 325

Query: 319 EFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEMESVDLEFRSDALKAVARKA 378
           E  GRLP+   L  L +    +ILTEP+ +L +QY  L + E VDL F  D++  +AR A
Sbjct: 326 ELQGRLPIRVELKALSQDDFKRILTEPEASLIRQYKALMKTEEVDLVFTDDSIDELARLA 385

Query: 379 LE-----RKTGARGLRSILEGVLLDTMYEIPSKKDVSKVVIDESVI 419
            E        GAR L ++LE  LL+ +    S +    V ID +++
Sbjct: 386 AEINGSVENIGARRLHTVLER-LLEEISFAASDRAGETVTIDAALV 430