Pairwise Alignments

Query, 360 a.a., putative integrative genetic element Ppu40, integrase from Pseudomonas putida KT2440

Subject, 198 a.a., type 1 fimbria switch DNA invertase FimE from Escherichia coli ECRC62

 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 17/142 (11%)

Query: 192 IIVAVDTGFRRAELLGLSAPDFQ--EGMIHLYAGQTKNGDARAIPATSRVARILHRRRMN 249
           I++A   G R +ELL L   D    EG I++   + KNG +   P        + R  + 
Sbjct: 32  ILLAYRHGMRISELLDLHYQDLDLNEGRINIR--RLKNGFSTVHPLRFDEREAVERWTLE 89

Query: 250 LTTFEG------LTVSSLRHQWATLRAYM-----GMEEDP--QFIVHMLRHTCASRLVQR 296
              ++G      + +S    + +  +AY      G+E     Q   HMLRH C   L +R
Sbjct: 90  RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAER 149

Query: 297 GVPLASVQHWMGHKNINTTLRY 318
           G     +Q ++GH+NI  T+RY
Sbjct: 150 GADTRLIQDYLGHRNIRHTVRY 171