Pairwise Alignments

Query, 579 a.a., putative Sugar ABC transporter, periplasmic sugar-binding protein from Pseudomonas putida KT2440

Subject, 580 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 1078 bits (2789), Expect = 0.0
 Identities = 509/578 (88%), Positives = 546/578 (94%), Gaps = 2/578 (0%)

Query: 4   NKHNR-RH-LTLAALLVLASVQGTAWADQYEEAAKKWIGSEFKPSTLTPEQQLAELQWFI 61
           NK+N+ RH ++LAA+L L+ +  +AWAD YE+AAKKWIGSEFKPSTLT EQQL EL+WFI
Sbjct: 3   NKNNKLRHSISLAAVLALSGLSASAWADAYEDAAKKWIGSEFKPSTLTAEQQLEELKWFI 62

Query: 62  KAAEPFRGMKINVVSETITTHEYESKVLAKAFSEITGIQLTHDLLQEGDVVEKLQTQMQS 121
           KAAEPFRGMKINVVSET+TTHEYESKVLAKAFSEITGI+LTHDLLQEGDVVEKLQTQMQS
Sbjct: 63  KAAEPFRGMKINVVSETLTTHEYESKVLAKAFSEITGIKLTHDLLQEGDVVEKLQTQMQS 122

Query: 122 DKNIYDGWVNDSDLIGTHFRYGKVESITDLMANEGKAYTSPTLDLKDFIGISFTTAPDGK 181
           DKNIYDGWVNDSDLIGTHFRYGK ESITDLMANEGK +TSPTLD+KDFIGISFTTAPDGK
Sbjct: 123 DKNIYDGWVNDSDLIGTHFRYGKTESITDLMANEGKDFTSPTLDIKDFIGISFTTAPDGK 182

Query: 182 VYQLPDQQFANLYWFRADWFERPELKARFKEKYGYELGVPVNWSAYEDIAKFFTEDVKEI 241
           +YQLPDQQFANLYWFRADWFERPELKA+FKEKYGY+LGVPVNWSAYEDIAKFF+EDVKEI
Sbjct: 183 IYQLPDQQFANLYWFRADWFERPELKAKFKEKYGYDLGVPVNWSAYEDIAKFFSEDVKEI 242

Query: 242 DGKRVYGHMDYGKKDPSLGWRFTDAWFSMAGGGDKGLPNGLPVDEWGIRVEDCHPVGSSV 301
           DGKRVYGHMDYGKKDPSLGWRFTDAWFSMAGGGDKGLPNGLPVDEWGIRVEDCHPVGSSV
Sbjct: 243 DGKRVYGHMDYGKKDPSLGWRFTDAWFSMAGGGDKGLPNGLPVDEWGIRVEDCHPVGSSV 302

Query: 302 TRGGDTNGPAAVYATQKYVDWMRAYAPKEAQGMTFSEAGPVPAQGNIAQQIFWYTAFTAD 361
           TRGGDTNGPAAVYATQKYVDWM+AYAP EA GMTFSE+GPVP+QGNIAQQIFWYTAFTAD
Sbjct: 303 TRGGDTNGPAAVYATQKYVDWMKAYAPPEAAGMTFSESGPVPSQGNIAQQIFWYTAFTAD 362

Query: 362 MTKPGLPVVNADGTPKWRMAPSPKGPYWEEGMKLGYQDTGSWTFFKSTPEKQRLAAWLYA 421
           M KPGLPVVNADGTPKWRMAPSP GPYWE+GMK GYQD GSWTF KSTPEKQ+LAAWLYA
Sbjct: 363 MVKPGLPVVNADGTPKWRMAPSPVGPYWEKGMKKGYQDVGSWTFLKSTPEKQKLAAWLYA 422

Query: 422 QFVTSKTVSLKKTIVGLTPIRESDINSQAMTELAPKLGGLVEFYRSPARVQWTPTGTNVP 481
           QFVTSKTVSLKKTIVGLTPIRESDINSQAMT++APKLGGLVEFYRSPAR +W+PTGTNVP
Sbjct: 423 QFVTSKTVSLKKTIVGLTPIRESDINSQAMTDMAPKLGGLVEFYRSPARTEWSPTGTNVP 482

Query: 482 DYPRLAQLWWSHIAEVASGEKTPQEALDGLARDQDRMMERLQRSNAQATCAPKLNPEKDA 541
           DYPRLAQLWWS+IA  ASGEKTPQ+ALD LA++QD +M RL+RS  Q  C PK+NPE+DA
Sbjct: 483 DYPRLAQLWWSNIAAAASGEKTPQQALDNLAKEQDAIMTRLERSKVQPVCGPKMNPERDA 542

Query: 542 QYWFDQPGAPKAKLANEKPMGETVSYNELLKSWEAARK 579
           QYWFDQPGAPK KLANEKP GETV+YN+LLK WEAARK
Sbjct: 543 QYWFDQPGAPKPKLANEKPKGETVNYNDLLKQWEAARK 580