Pairwise Alignments

Query, 579 a.a., putative Sugar ABC transporter, periplasmic sugar-binding protein from Pseudomonas putida KT2440

Subject, 573 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  792 bits (2046), Expect = 0.0
 Identities = 378/575 (65%), Positives = 461/575 (80%), Gaps = 11/575 (1%)

Query: 8   RRHLTLAALLVLASVQGTAWADQYEEAAKKWIGSEFKP-STLTPEQQLAELQWFIKAAEP 66
           RRHL      +L ++ G+A+A    E AK+++  E    S+L+  +Q  ELQWF+ AA+P
Sbjct: 2   RRHLMTTTAAMLLAMTGSAFAGM--EEAKQFLDKEIGDMSSLSRAEQEKELQWFVDAAKP 59

Query: 67  FRGMKINVVSETITTHEYESKVLAKAFSEITGIQLTHDLLQEGDVVEKLQTQMQSDKNIY 126
           F GM+I VVSE++TTHEYESKVLA AF+ ITGI++THD++QEGDVVEK+QTQMQ+ +N+Y
Sbjct: 60  FSGMEIKVVSESLTTHEYESKVLAPAFTAITGIKVTHDIIQEGDVVEKIQTQMQTGQNLY 119

Query: 127 DGWVNDSDLIGTHFRYGKVESITDLMANEGKAYTSPTLDLKDFIGISFTTAPDGKVYQLP 186
           DGWVNDSDLIGTH+RY +V ++TD MANEGK  T+P LDLKDFIG +FTTAPD K+YQLP
Sbjct: 120 DGWVNDSDLIGTHWRYQQVRNLTDFMANEGKDVTNPGLDLKDFIGSAFTTAPDKKLYQLP 179

Query: 187 DQQFANLYWFRADWFERPELKARFKEKYGYELGVPVNWSAYEDIAKFFTEDVKEIDGKRV 246
           DQQFANLYWFR DWF   + KA FK KYGY+LGVPVNWSAYEDIA+FFT   +++ GK+V
Sbjct: 180 DQQFANLYWFRYDWFNDDKNKADFKAKYGYDLGVPVNWSAYEDIAEFFTG--RDVGGKKV 237

Query: 247 YGHMDYGKKDPSLGWRFTDAWFSMAGGGDKGLPNGLPVDEWGIRVED-CHPVGSSVTRGG 305
           +GHMDYGKKDPSLGWRFTDAW SMAG GDKGLPNGLPVDEWGI+V D   PVGS V RGG
Sbjct: 238 FGHMDYGKKDPSLGWRFTDAWLSMAGNGDKGLPNGLPVDEWGIKVNDKSQPVGSCVARGG 297

Query: 306 DTNGPAAVYATQKYVDWMRAYAPKEAQGMTFSEAGPVPAQGNIAQQIFWYTAFTADMTKP 365
           DTNGPA+VY+ +KY++W++ YAP EAQGMTFSE+GPVPAQGN+AQQIFWYTAFTADM KP
Sbjct: 298 DTNGPASVYSIEKYLEWLKKYAPPEAQGMTFSESGPVPAQGNVAQQIFWYTAFTADMAKP 357

Query: 366 GLPVVNADGTPKWRMAPSPKGPYWEEGMKLGYQDTGSWTFFKSTPEKQRLAAWLYAQFVT 425
           GLPVVN DG+PKWR+APSP G YW++GMKLGYQD GSWT  KSTP+ +  AAWLYAQFVT
Sbjct: 358 GLPVVNEDGSPKWRVAPSPHGVYWKDGMKLGYQDVGSWTLMKSTPDDRAKAAWLYAQFVT 417

Query: 426 SKTVSLKKTIVGLTPIRESDINSQAMTELAPKLGGLVEFYRSPARVQWTPTGTNVPDYPR 485
           SKTV +KK+ VGLT IR++ I+ ++ T+ A KLGGL+EFYRSPARVQW+PTGTNVPDYP+
Sbjct: 418 SKTVDVKKSHVGLTFIRDTTIHHKSFTDRASKLGGLIEFYRSPARVQWSPTGTNVPDYPK 477

Query: 486 LAQLWWSHIAEVASGEKTPQEALDGLARDQDRMMERLQRSNAQATCAPKLNPEKDAQYWF 545
           LAQLWW  I + +SG KT Q A+D L  +Q+++M R++R+  Q    PKL  E D  YW 
Sbjct: 478 LAQLWWQAIGDASSGAKTAQAAMDSLCAEQEKVMARIERAGVQGDIGPKLAEEHDIDYWN 537

Query: 546 DQPG-----APKAKLANEKPMGETVSYNELLKSWE 575
                    AP+ K+ANEK    TV+Y+EL+KSW+
Sbjct: 538 KDAVSKGNLAPQLKIANEKEKPVTVNYDELVKSWQ 572