Pairwise Alignments

Query, 266 a.a., Sugar ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 276 a.a., ABC transporter for D-Mannitol and D-Sorbitol, permease component 1 (from data) from Pseudomonas simiae WCS417

 Score =  142 bits (357), Expect = 1e-38
 Identities = 74/261 (28%), Positives = 136/261 (52%), Gaps = 5/261 (1%)

Query: 6   SMALLLYFFFLLVPIYWLLNMSFKSNAEILGGLTLWPQAFTLDNYRVIFTDASWYSGYIN 65
           ++A+L++F     PI+W++  SFK+  +       +    TL+NY  I   ++++S   N
Sbjct: 20  AIAILIFF-----PIFWMVLTSFKTEIDAFATPPQFIFTPTLENYLHINERSNYFSYAWN 74

Query: 66  SLYYVCLNTLISLLVALPAAYAFSRYRFLGDRHLFFWLLTNRMAPPAVFLLPFFQLYSSI 125
           S+      T + LL+++PAAY+ + Y     +    W+L+ +M PP   L+P + L  S 
Sbjct: 75  SVLISFSATALCLLISVPAAYSMAFYETQRTKGTLLWMLSTKMLPPVGVLMPIYLLAKSF 134

Query: 126 GLFDTHIAVALAHCLFNVPLAVWILEGFMSGVPREIDETAYIDGYSFPRFFVKIFIPLIG 185
           GL DT IA+ + + L N+P+ VW++  +   +P++I E A +DG +  +  V++ +P+  
Sbjct: 135 GLLDTRIALIIIYTLINLPIVVWMVYTYFKDIPKDILEAARLDGATLWQEMVRVLLPIAK 194

Query: 186 SGIGVTAFFCFMFSWVELLLARTLTSVNAKPIAAVMTRTVSASGIDWGVLAAAGVLTILP 245
            G+  T     +  W E   +  LTS +A P+ A++    S  G+ W  L+A   L   P
Sbjct: 195 GGLASTVLLSLILCWNEAFWSLNLTSSSAAPLTALIASYSSPEGLFWAKLSAVSTLACAP 254

Query: 246 GMLVIWFVRNHVAKGFALGRV 266
            ++  W  +  + +G + G V
Sbjct: 255 ILIFGWISQKQLVRGLSFGAV 275