Pairwise Alignments

Query, 288 a.a., sugar ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 308 a.a., ABC transporter membrane spanning protein from Agrobacterium fabrum C58

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 77/272 (28%), Positives = 124/272 (45%), Gaps = 8/272 (2%)

Query: 13  LVLPVFLLVAFSAVVPMMTVVNYSVQDI----FDQSSRYFVGADWYRQVLRDPALHDALL 68
           L+ P  L+VA   V P++  ++ S Q +       +SR F  ++ Y  +   P    +  
Sbjct: 28  LIAPAVLMVAAIIVWPLVLAIDLSFQQVKIPRLGGASRPFSLSN-YTWLFSSPEFWLSCW 86

Query: 69  RQFIYSACVLLIEIPLGIGIALAMPTKGRMASVCLIVMAIPLLIPWNVVGTIWQIFGRAD 128
                   V    + +G+  AL    + +  SV  + MA+P  +P  +   I+       
Sbjct: 87  VTLKLVVVVTAGSVAVGLSTALLANNRFKGRSVARLGMALPWAVPEIIAVVIFAWMFDTS 146

Query: 129 IGLLGASLAKLGVSYN---YAGDPFDAWLTVLVMDVWHWTSLVALLCYSGLRAIPDVYYQ 185
            GL G    KLG +     +      A+  V +  VW     V+++C +GL++IP  YY 
Sbjct: 147 FGLFGWLAIKLGFTDQMIPWVSSSTAAFWAVAITMVWKGFPFVSIMCLAGLQSIPADYYA 206

Query: 186 AARIDRASGWAVFRHIQLPKLKNVLVIALMLRFMDSFMIYTEPFVLTGGGPGNATTFLSQ 245
           AA++D AS W  FR I +P L  VL + L+L  +  F  ++   VLTGGGP  +T  LS 
Sbjct: 207 AAKVDGASVWQRFRWITMPLLMPVLGVTLVLTLLWVFRDFSIIKVLTGGGPLRSTQTLSI 266

Query: 246 TLTRMAVGQFDLGPAAAFSLVYFLIILLVSWL 277
                A    + G AAA  ++  +I ++ S L
Sbjct: 267 MTYDQAFQYHNFGRAAAVGVLTLVICIVASLL 298