Pairwise Alignments

Query, 288 a.a., sugar ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 297 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

 Score =  107 bits (266), Expect = 4e-28
 Identities = 63/234 (26%), Positives = 113/234 (48%), Gaps = 1/234 (0%)

Query: 12  WLVLPVFLLVAFSAVVPMMTVVNYSVQDIFDQSSRYFVGADWYRQVLRDPALHDALLRQF 71
           W++ P    V    V P++  +  S+++        FVG   Y ++L D   H+A +  +
Sbjct: 21  WMMAPAVAFVGLMIVFPILYAIWLSLRENSLGMDDRFVGLANYVELLSDGEFHNAFILTW 80

Query: 72  IYSACVLLIEIPLGIGIALAMPTKGRMASVCLIVMAIPLLIPWNVVGTIWQIFGRADIGL 131
           +     L +++ +G  +   +       ++      +P ++P  VVG +  +     +G+
Sbjct: 81  VLYGLALAMQMVIGTWLGFTLNRVRSARNLVRTAAIMPFMMPPVVVGMMAIVILDPAVGV 140

Query: 132 LGASLAKLGVSYN-YAGDPFDAWLTVLVMDVWHWTSLVALLCYSGLRAIPDVYYQAARID 190
               L ++G+  + +  DP    LTV  +D W W+ L+ LL   GL+++P   ++AA ID
Sbjct: 141 ANWLLGQVGIGPSLWLADPKWVLLTVAAVDTWQWSPLIGLLVLGGLQSLPTKVFEAAEID 200

Query: 191 RASGWAVFRHIQLPKLKNVLVIALMLRFMDSFMIYTEPFVLTGGGPGNATTFLS 244
              GW    HI LP L   L+ A +LR +D    +   ++ T GGPGNA+T L+
Sbjct: 201 GVIGWKRLVHITLPLLAPTLLSAAILRSVDLLRFFDVIYITTRGGPGNASTTLN 254