Pairwise Alignments

Query, 288 a.a., sugar ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 288 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  395 bits (1016), Expect = e-115
 Identities = 186/282 (65%), Positives = 227/282 (80%)

Query: 7   NNKAWWLVLPVFLLVAFSAVVPMMTVVNYSVQDIFDQSSRYFVGADWYRQVLRDPALHDA 66
           NNKAW++VLPV +LVAFSAV+P+MTVVNYSVQD F  +  ++ G  W++++L      +A
Sbjct: 6   NNKAWFMVLPVLVLVAFSAVIPLMTVVNYSVQDTFGNNQFFWAGTQWFQEILSSDRFWNA 65

Query: 67  LLRQFIYSACVLLIEIPLGIGIALAMPTKGRMASVCLIVMAIPLLIPWNVVGTIWQIFGR 126
           L R  ++S  +L IEIPLGI IAL MP  G    +CL+ MA+PLL+PWNVVGTIWQ+FGR
Sbjct: 66  LGRNLVFSGIILAIEIPLGIFIALKMPKSGIGVPICLVTMALPLLVPWNVVGTIWQVFGR 125

Query: 127 ADIGLLGASLAKLGVSYNYAGDPFDAWLTVLVMDVWHWTSLVALLCYSGLRAIPDVYYQA 186
           +DIGLLG    +LG+ YNY  DP DAW+TV++MDVWHWTSLV LLCY+ L +IPD YYQA
Sbjct: 126 SDIGLLGYYANQLGLDYNYVNDPVDAWITVVIMDVWHWTSLVVLLCYASLVSIPDAYYQA 185

Query: 187 ARIDRASGWAVFRHIQLPKLKNVLVIALMLRFMDSFMIYTEPFVLTGGGPGNATTFLSQT 246
           ARID AS +AVFR IQLPK+K VL+IA +LRFMDSFMIYTEPFV+TGGGPGN+TTFLS  
Sbjct: 186 ARIDGASRFAVFRFIQLPKMKRVLLIAFLLRFMDSFMIYTEPFVVTGGGPGNSTTFLSID 245

Query: 247 LTRMAVGQFDLGPAAAFSLVYFLIILLVSWLFYTAMTHADKD 288
           L +MA+GQFDLGPAAA SL+YFLIILL+SW+FYT MT  D +
Sbjct: 246 LVKMALGQFDLGPAAAMSLIYFLIILLLSWVFYTVMTSHDAE 287