Pairwise Alignments

Query, 288 a.a., sugar ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 324 a.a., trehalose/maltose ABC transporter permease from Agrobacterium fabrum C58

 Score =  109 bits (272), Expect = 9e-29
 Identities = 80/288 (27%), Positives = 135/288 (46%), Gaps = 22/288 (7%)

Query: 10  AWWLVLPVFLLVAFSAVVPMMTVVNYSVQD--IFDQSSRYFVGAD----W---------Y 54
           AW  + P FL++A  A  P++  V +S  D  + +     FVG      W         Y
Sbjct: 27  AWLFLAPTFLVLALVAGWPLVRTVWFSFTDASLTNLDGAQFVGLKNYLTWITLSSGRTIY 86

Query: 55  RQVLRDPALHDALLRQFIYSACVLLIEIPLGIGIALAMPTKGRMASVCLIVMAIPLLIPW 114
           R +L DPA   A+L    ++   +  E  LG+ +AL +  + +        + +P  IP 
Sbjct: 87  RGLLADPAWWGAVLNTLKFTILSVSFETVLGLIVALVLNAEFKGRGFVRAAILVPWAIPT 146

Query: 115 NVVGTIWQIFGRADIGLLGASLAKLGVSYN---YAGDPFDAWLTVLVMDVWHWTSLVALL 171
            V   +W        G+L      LG+  N   +  +P  A + VL++D+W  T  +ALL
Sbjct: 147 IVSAQMWAWMLNDQFGILNDLFLNLGLISNKIAWTANPDTAMVAVLIVDIWKTTPFMALL 206

Query: 172 CYSGLRAIPDVYYQAARIDRASGWAVFRHIQLPKLKNVLVIALMLRFMDSFMIYTEPFVL 231
             +GL+ +P   Y+AA++D      VF  + LP ++  L++A++ R +D+  ++   ++L
Sbjct: 207 ILAGLQMVPKDMYEAAKVDGIHPVKVFFRVTLPMIRPALMVAVIFRMLDAMRVFDLIYIL 266

Query: 232 TGGGPGNATTFLSQTLTRMAVGQFD-LGPAAAFSLVYFLIILLVSWLF 278
           T   P NA T     L R  +  FD     AA S + FLII  ++ ++
Sbjct: 267 T---PNNAQTRTMSVLARENLFDFDKFAYGAAASTMLFLIIASITVIY 311