Pairwise Alignments

Query, 288 a.a., sugar ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 310 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 72/279 (25%), Positives = 130/279 (46%), Gaps = 5/279 (1%)

Query: 3   NKVSNNKAWWLVL---PVFLLVAFSAVVPMMTVVNYSVQDIFDQSSRY-FVGADWYRQVL 58
           + V++++A  L++   P  LL     ++PM     YS+       +   FVG   ++ + 
Sbjct: 22  SSVAHDRALTLLVFLPPALLLFTLFVILPMGEAAWYSLYRWNGYGTPTDFVGLKNFQVLF 81

Query: 59  RDPALHDALLRQFIYSACVLLIEIPLGIGIALAMPTKGRMASVCLIVMAIPLLIPWNVVG 118
            + A   AL+   +     +LI+IPL I +A+ +  +        +V  +P ++     G
Sbjct: 82  GNAAFSQALMNNGLIILISILIQIPLAIWLAMMLAHRIPGVVAFRLVFFLPYVLADVAAG 141

Query: 119 TIWQIFGRADIGLLGASLAKLGVSYNYA-GDPFDAWLTVLVMDVWHWTSLVALLCYSGLR 177
            IW+     D GL  A     G +  Y   D   A   VL + VW +     +L  +GL+
Sbjct: 142 LIWRFVYDGDYGLFAAISNFFGFANPYVLADKDVAIYAVLGVIVWKYFGFHMMLFIAGLQ 201

Query: 178 AIPDVYYQAARIDRASGWAVFRHIQLPKLKNVLVIALMLRFMDSFMIYTEPFVLTGGGPG 237
           ++     +AA ID ASGW  FR++ LP L + + +++    + S  ++     LTGGGP 
Sbjct: 202 SVDKNVLEAAEIDGASGWQKFRYVTLPMLGSTVRLSVFFAVIGSLQLFDMIMPLTGGGPS 261

Query: 238 NATTFLSQTLTRMAVGQFDLGPAAAFSLVYFLIILLVSW 276
           N+T  +   L    V +  +G  +A  +V F+I + +++
Sbjct: 262 NSTQTMVTFLYTYGVMRMQVGLGSAVGVVLFVICVTLAF 300