Pairwise Alignments

Query, 365 a.a., Sugar ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 335 a.a., Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3) from Variovorax sp. SCN45

 Score =  207 bits (526), Expect = 4e-58
 Identities = 129/350 (36%), Positives = 192/350 (54%), Gaps = 31/350 (8%)

Query: 1   MAEIRLRQLAHSYSRQPASEADYALHALEHVWEQGGAYALLGPSGCGKSTLLNIISGLLT 60
           MA + LR +   Y   P  +A+  +H +           ++GPSGCGKSTLL +++GL  
Sbjct: 1   MAALSLRNVIKRYGHGP--KANQVIHGVSAEISDHEFIVIVGPSGCGKSTLLRMVAGLEE 58

Query: 61  PSHGEVLFDGKPVNQLSPQARNIAQVFQFPVVYDTMTVFDNLAFPLRNQGLDEARVRARV 120
            S GE+    + VN L P  R+IA VFQ   +Y  MTVFDN+A+ L+   +  A ++ RV
Sbjct: 59  ISAGEISIGNRVVNNLEPSERDIAMVFQNYALYPHMTVFDNMAYGLKILKVPVAEIKTRV 118

Query: 121 EEIAEVLELTAVLRKKARNLTADEKQKVSMGRGLVRDDVSAILFDEPLTVIDPHLKWKLR 180
           ++ A++LEL  +L +K R L+  ++Q+V+MGR +VR      LFDEPL+ +D  L+ + R
Sbjct: 119 DKAAKILELGHLLARKPRELSGGQRQRVAMGRAIVRQP-QVFLFDEPLSNLDAKLRAQTR 177

Query: 181 RKLKQIHEQFNITMIYVTHDQLEASTFADKIAVMHGGRIVQFGTPRELFERPRHTFVGYF 240
            +++++H +  IT ++VTHDQ+EA T A +I VM+GG + QF TP E++ RP  TFV  F
Sbjct: 178 LEIQKLHRELGITSLFVTHDQVEAMTLAQRIIVMNGGVMDQFATPEEVYNRPATTFVASF 237

Query: 241 IGSPGMNLIDVRAEAGAVVFGDVQLVLPDGLCERLASLAGGRLQVGIRPEFVQLWDSPFE 300
           IGSP MNL+     A  V  G +                     +GIRPE ++L     E
Sbjct: 238 IGSPPMNLL---KHAPGVRPGQI---------------------LGIRPEHMKL----DE 269

Query: 301 GAYPARVLDVEDLGTYRIVTLELGGVALKARLGEDRPLPVDQTWVSLPAQ 350
             +  +V  VE LG  R+V   +G   +  R  E    PV    V + A+
Sbjct: 270 SGWTVQVEQVELLGAERLVYGRIGDEQIIMRTDEGDHPPVTGDTVKIAAR 319