Pairwise Alignments

Query, 365 a.a., Sugar ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 347 a.a., sugars ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  221 bits (563), Expect = 2e-62
 Identities = 134/324 (41%), Positives = 187/324 (57%), Gaps = 18/324 (5%)

Query: 1   MAEIRLRQLAHSYSRQPASEADYALHALEHVWEQGGAYALLGPSGCGKSTLLNIISGLLT 60
           MA + L+ +  SY       A   +H ++     G    L+GPSGCGKSTLL +I+GL T
Sbjct: 1   MAPVTLKSVKKSYG------ALATIHGVDIDIADGEFVVLVGPSGCGKSTLLRMIAGLET 54

Query: 61  PSHGEVLFDGKPVNQLSPQARNIAQVFQFPVVYDTMTVFDNLAFPLRNQGLDEARVRARV 120
            + G++    + VN++ P+ R+IA VFQ   +Y  MTV  N+AF L ++G  +A V  RV
Sbjct: 55  ITGGDISISNRVVNEIEPKDRDIAMVFQNYALYPHMTVARNMAFSLEHRGGSKAEVAERV 114

Query: 121 EEIAEVLELTAVLRKKARNLTADEKQKVSMGRGLVRDDVSAILFDEPLTVIDPHLKWKLR 180
              AE+L LT +L +  R L+  ++Q+V+MGR +VR+     LFDEPL+ +D  L+  +R
Sbjct: 115 NWAAEILGLTPLLERFPRQLSGGQRQRVAMGRAIVRNP-QVFLFDEPLSNLDAKLRVVMR 173

Query: 181 RKLKQIHEQFNITMIYVTHDQLEASTFADKIAVMHGGRIVQFGTPRELFERPRHTFVGYF 240
            ++K +H++  +T +YVTHDQ+EA T ADKI VM+ GR+ Q G P EL++RP + FV  F
Sbjct: 174 GEIKGLHQRLGVTTVYVTHDQVEAMTMADKIVVMNAGRVEQCGAPLELYDRPSNPFVAGF 233

Query: 241 IGSPGMNLIDVRAEAGAVVFGDVQLVLPDGLCERLASLAGGRLQVGIRPEFVQLWDSPFE 300
           IGSP MN I  R  A       V L LP G          G    GIRPE  +L D    
Sbjct: 234 IGSPAMNFIKGRLTADGFEADGVTLPLPPG-------HVSGDAIYGIRPEHFELADH--- 283

Query: 301 GAYPARVLDVEDLGTYRIVTLELG 324
              PA VL VE +G+   VT+ LG
Sbjct: 284 -GLPATVLLVEPMGSETQVTMMLG 306