Pairwise Alignments

Query, 562 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1247 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  387 bits (993), Expect = e-111
 Identities = 218/528 (41%), Positives = 298/528 (56%), Gaps = 7/528 (1%)

Query: 18   TDLRGNITYVNQQFCSISGYSREELLGANHRILNSGLHEPTFFVGMWRALVAGRVWKGEI 77
            TD R NI+ VN+ F  I+GYS  E LG   R+L SGLH+  F+  MW  L A   W+GEI
Sbjct: 698  TDTRQNISAVNRAFSEITGYSEAEALGNTPRLLASGLHDSAFYAAMWHQLTAQGHWQGEI 757

Query: 78   CNRSKDGSLY--WVDSTMVPLVDPLTGQVRKYVSIRFDVTEKRQLLHTLQWRVGHDVLTG 135
             NR K+G LY  W+  + V   + L   +  +V++  D++  +     L ++  HD LTG
Sbjct: 758  SNRRKNGELYPSWLTISAVRNREQL---ITHFVAVFADISSLKLAQARLDYQAHHDPLTG 814

Query: 136  LPNRAYLSDLLNQALAYSRCEGISLAVCMLDLDGFKAVNDGYGHAVGDLLLVEVAQRLKS 195
            LPNR      L  AL   +  G   AV  LDLD FK +ND  GH +GDLLL ++A RLK 
Sbjct: 815  LPNRTLFESRLQAALNGHQETGQQGAVLFLDLDRFKHINDSLGHPIGDLLLKDIAVRLKE 874

Query: 196  ILRGGDAVARLSGDEFVLILRDVDDEHQLHAALQRVLRALAAPCVVREHTLSLSASIGVT 255
             LR  D VARL GDEF+++L  +           ++L     P    EH   +SASIG +
Sbjct: 875  QLRDIDTVARLGGDEFIILLPGLQHASDAQYLANKLLACFTPPFQAGEHEFFISASIGTS 934

Query: 256  LYPQDDEDADTLVRHADQAMYVAKQRGRNRYHLFDVSQEQELKATHQTVARVRRALRNGE 315
            LYP+D  D  TLV++AD AMY +K +GRNR   +      +          +RRA+   E
Sbjct: 935  LYPEDGTDVATLVKNADAAMYRSKAKGRNRVESYTRDLTAQANERVALEHELRRAIERDE 994

Query: 316  LCLYYQPKVNLRTGKVLGFEGLLRWQRPGRGVVPPGDFLPWVEQTDLIVEIGEWVIGQAL 375
            L LYYQPK++L T +++G E L+RW  P  G VPP  F+   E+  +I++IG+WV+ QA 
Sbjct: 995  LSLYYQPKLSLATHELIGAEALIRWHHPTFGDVPPEHFIALAEENGMILQIGDWVLEQAC 1054

Query: 376  SQLQAWQRQGQPWS-LSVNIAARHLQRSDFAERLQQLLAAYPAVDPALLDLEIVESVAID 434
             Q+ AWQ     +  LSVN+A   L+      R++QLL  Y  +DP  L LEI E+  + 
Sbjct: 1055 RQMHAWQGHFDDFGPLSVNLAGAQLRHPGLLGRIKQLLHDY-QLDPGRLQLEITENFIMS 1113

Query: 435  NLQHVSRCLDACRALGVRFSLDDFGTGYSSLSYLKRLPTQTIKIDQSFVRDILHDQDDLA 494
              +     L   + LGV+ ++DDFGTGYSSLSYLKRLP   +KIDQSFVR +  D  D A
Sbjct: 1114 QAEEALDVLHQLKDLGVQLAIDDFGTGYSSLSYLKRLPLDFLKIDQSFVRGLPDDPHDAA 1173

Query: 495  LTEAVIGLARAFGREVIAEGLESVEHGRVLMGLGCELAQGYCIARPMP 542
            +  A+I L  +    +IAEG+E+      L   GCE  QGY ++ P+P
Sbjct: 1174 IVRAIIALGHSMQFTIIAEGVENPAQQAFLAAEGCEQMQGYIVSLPLP 1221