Pairwise Alignments

Query, 562 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  325 bits (833), Expect = 7e-93
 Identities = 192/542 (35%), Positives = 296/542 (54%), Gaps = 19/542 (3%)

Query: 18   TDLRGNITYVNQQFCSISGYSREELLGANHRILNSGLHEPTFFVGMWRALVAGRVWKGEI 77
            TD  G I   N+ F  +SGY+  E+L     +L     +      + + L     W+GE+
Sbjct: 732  TDPAGYIVQANEAFSRVSGYAVSEVLDQLPGMLTVDEQQEGHLRYVVKQLHQRGSWEGEV 791

Query: 78   CNRSKDGSLY--WVDSTMVPLVDPLTGQVRKYVSIRFDVTEKR---QLLHTLQWRVGHDV 132
              + +DG  Y  WV  T V L D   G +  YV    D++E++   Q +H L +   +D 
Sbjct: 792  WLKRRDGDHYPAWVGITAV-LDDE--GDLASYVCFFTDISERKASEQRIHRLAY---YDA 845

Query: 133  LTGLPNRAYLSDLLNQALAYSRCEGISLAVCMLDLDGFKAVNDGYGHAVGDLLLVEVAQR 192
            LT LPNR    D L  AL  +  +   + +  LDLD FK +ND  GHA GD +L ++A R
Sbjct: 846  LTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFKPINDSLGHAAGDRMLKDMALR 905

Query: 193  LKSILRGGDAVARLSGDEFVLIL-----RDVDDEHQLHAALQRVLRALAAPCVVREHTLS 247
            L + +   D VAR+ GDEF L+L     R++     +H A + +L +L  P V+      
Sbjct: 906  LLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAIHVA-ENILGSLVRPFVLENREFF 964

Query: 248  LSASIGVTLYPQDDEDADTLVRHADQAMYVAKQRGRNRYHLFDVSQEQELKATHQTVARV 307
            ++ASIG+ L PQD  +   L+++AD AMY AK+RG+N +  +            +  + +
Sbjct: 965  VTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNFQFYQAEMNASALERLELESDL 1024

Query: 308  RRALRNGELCLYYQPKVNLRTGKVLGFEGLLRWQRPGRGVVPPGDFLPWVEQTDLIVEIG 367
            R A+   E  LYYQP+ +    ++ G E LLRW+ P RG+VPPGDF+P +E+  L+V++G
Sbjct: 1025 RHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLVPPGDFIPVIEELGLVVDVG 1084

Query: 368  EWVIGQALSQLQAWQR-QGQPWSLSVNIAARHLQRSDFAERLQQLLAAYPAVDPALLDLE 426
            +WV+ +A  QL+AW + + +   +SVNI+AR         R+  +L     + PA L+LE
Sbjct: 1085 DWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGTRIANILEE-SGLPPACLELE 1143

Query: 427  IVESVAIDNLQHVSRCLDACRALGVRFSLDDFGTGYSSLSYLKRLPTQTIKIDQSFVRDI 486
            + ES+ +  +    + L + + LG+  ++DDFGTGYSSL+YLK+ P   +KID++FV  +
Sbjct: 1144 LTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGL 1203

Query: 487  LHDQDDLALTEAVIGLARAFGREVIAEGLESVEHGRVLMGLGCELAQGYCIARPMPASDV 546
               + D  +  A+I +A +    VIAEG+E+ E    L   GC+  QGY   RPMPA   
Sbjct: 1204 PEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQGYLFGRPMPAHQF 1263

Query: 547  QA 548
            +A
Sbjct: 1264 EA 1265