Pairwise Alignments

Query, 436 a.a., C4-dicarboxylate transport protein from Pseudomonas putida KT2440

Subject, 443 a.a., C4 dicarboxylate transporter DctA (from data) from Pseudomonas simiae WCS417

 Score =  400 bits (1029), Expect = e-116
 Identities = 204/419 (48%), Positives = 293/419 (69%), Gaps = 2/419 (0%)

Query: 7   RSIFLQVVLGLALGIACGLSFPDLSLQLKPLGDGFIKLIKMLIGLIVFCVVVSGISGAGD 66
           +S++ QV++ + +GI  G  +P   + LKPLGDGFIKLIKM+I  I+FC VVSGI+G   
Sbjct: 9   KSLYFQVIVAIVIGILLGHFYPQTGVALKPLGDGFIKLIKMVIAPIIFCTVVSGIAGMQS 68

Query: 67  LKKVGRIGLKSVIYFEVLTTLALVIGLVFAFTSGIGSGANIHLDQLSAADANGLAERGQH 126
           +K VG+ G  +++YFE+++T+AL+IGL+       G+G +I +  L A+        G+ 
Sbjct: 69  MKSVGKTGGYALLYFEIVSTVALLIGLIVVNVVQPGNGMHIDVATLDASKVAAYVTAGKD 128

Query: 127 IHGATAFFMDLIPTSVIGAFADNNILQVLLFSVLFGSALNLVGDSAAGISRLINELSHVI 186
                 F +++IP +++GAFA+ +ILQVL+FSV+FG AL+ +G     +   I+  +HV+
Sbjct: 129 -QSIVGFILNVIPNTIVGAFANGDILQVLMFSVIFGFALHRLGAYGKPVLDFIDRFAHVM 187

Query: 187 FRIMGMIVRLAPIGVFGAIAFTTSKYGLASLQHLGGLVALFYLTCAGFVLIVLGTVMRLS 246
           F I+ MI++LAPIG  GA+AFT   YG+ SL  LG L+  FY+TC  FVL+VLG + R  
Sbjct: 188 FNIINMIMKLAPIGALGAMAFTIGAYGVGSLVQLGQLMICFYITCLLFVLVVLGGICRAH 247

Query: 247 GLKLLPLIKYLREELTIVLGTASSDAVLPQIMRKLEHLGIGSSTVGLVIPTGYSFNLDGF 306
           G  ++ LI+Y+REEL IVLGT+SS++ LP+++ K+E LG   S VGLVIPTGYSFNLDG 
Sbjct: 248 GFSVIKLIRYIREELLIVLGTSSSESALPRMLIKMERLGAKKSVVGLVIPTGYSFNLDGT 307

Query: 307 SIYLTLAIVFIANATGTPLEMTDLLTILLVSLVTSKGAHGIPGSALVILAATLTAVPAIP 366
           SIYLT+A VFIA AT T +++T  +T+LLV L++SKGA G+ GS  ++LAATL+AV  +P
Sbjct: 308 SIYLTMAAVFIAQATDTHMDITHQITLLLVLLLSSKGAAGVTGSGFIVLAATLSAVGHLP 367

Query: 367 VVGLVLVLAVDWFMGIGRALTNLIGNCVATVAIARWEKDIDLERAQNVL-DGKPGFAPT 424
           V GL L+L +D FM   RALTNL+GN VAT+ +A+W K++D ++ Q+ L  G  G + T
Sbjct: 368 VAGLALILGIDRFMSEARALTNLVGNAVATIVVAKWVKELDTDKLQSELASGGTGISET 426