Pairwise Alignments

Query, 292 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 316 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 96/309 (31%), Positives = 131/309 (42%), Gaps = 36/309 (11%)

Query: 2   NFSSDNIQLFLAVLDHGSFSAAARALKRVPSAVSMAIGNLEAELGYSLFERGPREVRPTA 61
           N  ++ + LFL VL+ GSFSAAAR     PSAV+  I +LE+ +G  LF+R    V PT 
Sbjct: 4   NTLTNQLSLFLDVLETGSFSAAARRHPLTPSAVARRIDSLESSVGSRLFQRSTHAVVPTP 63

Query: 62  QALALEPHARLIAEQLGLLQVHALELSQGLESSLTLAVAPDIDHRPLLAAIANLGKRHPL 121
             +A    AR I  +L L +  A+ LS   E  + +        R L   IA+    +P 
Sbjct: 64  AGVAFAERARRIVSELQLARAEAVSLSHAPEGLIRVDAPAAFGRRHLAPVIADFLNVYPG 123

Query: 122 LDIALLSAPQEEALHLLDS---------GRADLCVAFAGLQVDARRGFQHIGMESLVATL 172
           LD+          LHL+DS         G+ DL V  AG  VD R     +     VA  
Sbjct: 124 LDV---------HLHLIDSFVDMQGAHLGKVDL-VLRAGHIVDTRLIATPLASIVRVACA 173

Query: 173 SPA---------HPALREGRIHDLEDLTQVRQILVRSRDLP--LADPRPLIGATHWSTDS 221
           SPA         HP  +E   HD  D   +        +L    A  RP       S ++
Sbjct: 174 SPAYLKSRGTPNHP--QELSEHDGLDWDGLAPTFAWRFELDGRRATYRP--RRIRMSANN 229

Query: 222 FDLALQMVEAGLGWGDLPLSRVAPLLASGRLVRLEFRNTRNELQLP-VHILWRKQQPLQQ 280
            +  L    AGLG   LP    +  L  G L+ L   N     +   ++ L  +QQP   
Sbjct: 230 AEALLSGALAGLGIAHLPTWLASEYLVRGELLPLFCENGLPSPETTGIYALRLEQQP-NA 288

Query: 281 AARLLIEQL 289
            +RLL+E L
Sbjct: 289 RSRLLLEYL 297