Pairwise Alignments

Query, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

Subject, 645 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  241 bits (614), Expect = 1e-67
 Identities = 175/535 (32%), Positives = 268/535 (50%), Gaps = 15/535 (2%)

Query: 115 LGQANGEFTQRPDAQMPAGYDPRQRPWYGAA-ANAGQTVLTAPYQGAVGGLMVTIATPVK 173
           +G  +G + + PD    A YDPR RPWY AA A+ G+TV T  Y      + + + T   
Sbjct: 118 IGLEDGTYAKWPDDPQLAKYDPRTRPWYKAAMASPGKTVRTPAYYYDKDDVAL-VGTARA 176

Query: 174 SKRNGELIGVVGGDVTLDTLVEIINSVDFGGIGHAFLADANGQVIVSP-NKDQVMKNLKD 232
              NG+  GV    V+L  L E++ S+  G  G+  L + +G V+V P N     K LK 
Sbjct: 177 LLENGKAKGVFVVSVSLKNLTELVKSIKLGESGYVMLVE-DGVVLVDPRNAAHNFKPLKG 235

Query: 233 IYPG--SNLRVAAGMQDVTLDGQDRIISFAPVAGLPSAQW-YIGLSIDRD-KAYAALSQF 288
           +            G  DV +DG   +   A V   P   W YIGL   R+  A A    +
Sbjct: 236 LGAAYAQLAETPQGSTDVVIDG---VHYMANVWTSPGLGWRYIGLIEHREVMAEATRMTY 292

Query: 289 RTSAIIAMLIAVAAIAGLLGLLIPVLMSPLTTMGRAMRDIAEGEGDLTRRLAVQNKDEFG 348
            T+ I+ +L+ +  +  +      V++ P+  +   ++ IA+GEGDL   L VQ KDE  
Sbjct: 293 LTALIVGVLVLIFGL--IAAAFSKVIVKPIGQVSTGLQSIAQGEGDLRHELQVQGKDETA 350

Query: 349 ELATSFNRFVERIHASISEVSSATRLVHDLSEKVVSASNASIIGSEEQSMRTNSVAAAIN 408
           ELA  FN+F+  I   I  + +A+  + + S+     ++     +  Q      V+ A N
Sbjct: 351 ELAGWFNKFLAAIRQLIQHIGAASANLQNASKVNSEVAHNMNEAAGRQREAVELVSTAFN 410

Query: 409 ELGAATQEIARNAADASQHASGASEQAHGGREVVEEAISAMTALSQRISESCAQIETLNA 468
           E+ A   E+AR+ + A++ A     +   G++ +E     +  L +R++ES   +  L A
Sbjct: 411 EMVATANEVARSCSGAAESAENGHRRVAEGKQQIEVTTDNVNRLGRRLTESSQAMVELEA 470

Query: 469 STDEIGKILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEE 528
            +  I +IL  I+ I++QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA RT +S  E
Sbjct: 471 GSRSINQILGTIRAIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALAKRTSDSTGE 530

Query: 529 IHRMITSLQVGSREAVHTMNTSQVSSEQTVQVANQAGERLASVTQRIGEIDGMNQSVATA 588
           I +++ +L+  ++E    M +    S  +V     A +    +   + EI   N  ++ A
Sbjct: 531 IEQLLGTLENKTQEVTQKMGSCLDLSRASVSSIESARDSFEGIQTSVNEIRDQNLQISAA 590

Query: 589 TEEQTAVVESLNLDITQINALNQQGVENL-NETLRHCDQLAQQAGRLKQLVGSFR 642
            EEQ +V E +N  I QI     + VE+L N       +L+  +  L  LVG F+
Sbjct: 591 AEEQHSVAEEINRHIQQIYD-EARLVESLANSAQDDSGRLSNLSDELNGLVGRFK 644