Pairwise Alignments

Query, 197 a.a., Transcriptional regulator, Cro/CI family from Pseudomonas putida KT2440

Subject, 175 a.a., DNA-binding protein from Pseudomonas simiae WCS417

 Score = 50.8 bits (120), Expect = 1e-11
 Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 14/170 (8%)

Query: 16  RLRQVRKARQMTLKQLSEASGVPLSTLSKMELAQVSVSYEKLAAAARALNVDIAQLFRAS 75
           RL+ +RK   +TL+ L+E SG+  S LSK+E    + S       A+ALNV + +LF   
Sbjct: 4   RLKLLRKKLGVTLEALAEKSGMTKSYLSKVERGLNTPSIAAALKLAKALNVKVEELFSED 63

Query: 76  GTVSAPVPVTVVVDSLPAAAGYSTGTYDYYPIAGDFPARRMTPAYARIIARERGQFDD-- 133
                   +    +    + GY+        +A     R + P     I     +F D  
Sbjct: 64  SVSLDSYSLVRSHERPDTSPGYAV-------LAHQVSERSLLP----FIIYPPAEFTDKT 112

Query: 134 FIRHPGQEFALVLSGRVRIEFETGEAVSIGPQETAYFDSQVGHIYLSESD 183
           F  H G+EF  V  G+V ++F   E V +   +  +F++Q  H   S  D
Sbjct: 113 FKEHLGEEFLFVHEGQVEVDF-MNERVILERGDALHFNAQKPHRLRSVGD 161