Pairwise Alignments

Query, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 319 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  331 bits (849), Expect = 1e-95
 Identities = 170/322 (52%), Positives = 223/322 (69%), Gaps = 13/322 (4%)

Query: 11  LDIGLLLYPGVQRAAVHGLADLFLVANRVAAELGAVELPHIRVSCWQADETGQLLPASDN 70
           +++G+L+Y G Q AAVHGL DLF VANR+AAE  + +LP +RVS WQ D TG+      +
Sbjct: 4   VELGVLIYQGAQLAAVHGLTDLFGVANRIAAEHQSAQLPLLRVSHWQVDVTGKPARVFSS 63

Query: 71  SAVTVPGLRVLIIPPSLESAPQAELLERHRAPLCLL------HGRGTVLASVCIGVFFIA 124
                  +  +++PPS+      E  E  +APL LL      H  GTVL  VCIG   +A
Sbjct: 64  HPGPEQPMMAVLVPPSI-----GEFTE-DQAPLALLEWIRQQHAAGTVLGGVCIGSIMLA 117

Query: 125 ASGLLDGRPACTHWNYVHALAQRFPRVRVEAQQPLLDDGDIVTSAGLMAWTDLGLRLLER 184
            SGLLDGR A THW+   + A R+P VR+EA +P++DDGD++T+AGLMAW++LGLRL++R
Sbjct: 118 RSGLLDGRSATTHWSSAKSFAARYPAVRLEADKPIVDDGDLITTAGLMAWSELGLRLVDR 177

Query: 185 FLGTTVAQETARYLAVDPV-AAPLPGAVFNPRLDHGDEAVLKVQHWLQGNGGQDADLATM 243
            +G ++A +TAR+L ++   +A   G+ F P L HGD A+LKVQHWLQ +G  D  LA M
Sbjct: 178 LMGPSIAADTARFLVIEHSDSASQCGSNFAPILGHGDAAILKVQHWLQASGAVDVSLAAM 237

Query: 244 AACAGLEARTFLRRFRAATGLRPTEYCQQVRVGRACRLLEFTRRTVEQIAWGVGYQDPGA 303
           A  AGLE RTFLRRFR ATGL+PTEYCQ +RVG+A ++LEFT  T++ IAW VGYQDP A
Sbjct: 238 AREAGLEERTFLRRFRNATGLKPTEYCQHLRVGKARQMLEFTNGTIDHIAWTVGYQDPSA 297

Query: 304 FRKVFQRVIGLTPSDYRRRFAV 325
           FR  F+++ GL PSDYR RF V
Sbjct: 298 FRATFKKITGLAPSDYRSRFGV 319